FROM ubuntu:xenial
MAINTAINER Bas Nijholt <bas@nijho.lt>

ENV LANG=C.UTF-8 LC_ALL=C.UTF-8
ENV PATH /opt/conda/bin:$PATH

RUN apt-get update --fix-missing && apt-get install -y \
    wget \
    bzip2 \
    ca-certificates \
    libglib2.0-0 \
    libxext6 \
    libsm6 \
    libxrender1 \
    git \
    mercurial \
    subversion \
    #texlive-full \
    python-pygments\
    gnuplot \
    make \
    && rm -rf /var/lib/apt/lists/*

RUN wget --quiet https://repo.anaconda.com/miniconda/Miniconda2-4.5.11-Linux-x86_64.sh -O ~/miniconda.sh && \
    /bin/bash ~/miniconda.sh -b -p /opt/conda && \
    rm ~/miniconda.sh && \
    ln -s /opt/conda/etc/profile.d/conda.sh /etc/profile.d/conda.sh && \
    echo ". /opt/conda/etc/profile.d/conda.sh" >> ~/.bashrc && \
    echo "conda activate base" >> ~/.bashrc

RUN apt-get install -y curl grep sed dpkg && \
    TINI_VERSION=`curl https://github.com/krallin/tini/releases/latest | grep -o "/v.*\"" | sed 's:^..\(.*\).$:\1:'` && \
    curl -L "https://github.com/krallin/tini/releases/download/v${TINI_VERSION}/tini_${TINI_VERSION}.deb" > tini.deb && \
    dpkg -i tini.deb && \
    rm tini.deb && \
    apt-get clean

RUN apt-get update -q && apt-get install -qy \
    texlive-full \
    python-pygments gnuplot \
    make git \
    && rm -rf /var/lib/apt/lists/*

RUN mkdir /environments
COPY environment.yml /environments/

RUN conda-env create -f /environments/environment.yml

ENTRYPOINT [ "/usr/bin/tini", "--" ]
CMD [ "/bin/bash" ]