[0KRunning with gitlab-runner 15.4.0 (43b2dc3d)[0;m
[0K on universal-tn4 d3cf9985[0;m
section_start:1714998064:prepare_executor
[0K[0K[36;1mPreparing the "docker" executor[0;m[0;m
[0KUsing Docker executor with image mambaorg/micromamba:1.4.3 ...[0;m
[0KAuthenticating with credentials from /root/.docker/config.json[0;m
[0KPulling docker image mambaorg/micromamba:1.4.3 ...[0;m
[0KUsing docker image sha256:bcfdda4930c6becbd40d3a8eb6d835e4d2275d16767fdd5000a25507d1c56b02 for mambaorg/micromamba:1.4.3 with digest mambaorg/micromamba@sha256:25b00e28c39abc2e698943c2279fa865d0ec7c97891c7faecafb5c6417313e71 ...[0;m
section_end:1714998076:prepare_executor
[0Ksection_start:1714998076:prepare_script
[0K[0K[36;1mPreparing environment[0;m[0;m
Running on runner-d3cf9985-project-3642-concurrent-2 via tnw-tn4.tudelft.net...
section_end:1714998081:prepare_script
[0Ksection_start:1714998081:get_sources
[0K[0K[36;1mGetting source from Git repository[0;m[0;m
[32;1mFetching changes with git depth set to 20...[0;m
Reinitialized existing Git repository in /builds/qt/kwant-scf/.git/
[32;1mChecking out f750ade0 as documentation...[0;m
Removing docs/build/
Removing micromamba/
Removing pymf/_version.py
[32;1mSkipping Git submodules setup[0;m
section_end:1714998098:get_sources
[0Ksection_start:1714998098:step_script
[0K[0K[36;1mExecuting "step_script" stage of the job script[0;m[0;m
[0KUsing docker image sha256:bcfdda4930c6becbd40d3a8eb6d835e4d2275d16767fdd5000a25507d1c56b02 for mambaorg/micromamba:1.4.3 with digest mambaorg/micromamba@sha256:25b00e28c39abc2e698943c2279fa865d0ec7c97891c7faecafb5c6417313e71 ...[0;m
[32;1m$ mkdir -p micromamba[0;m
[32;1m$ export MAMBA_ROOT_PREFIX=micromamba[0;m
[32;1m$ micromamba create -yf docs/environment.yml[0;m
__
__ ______ ___ ____ _____ ___ / /_ ____ _
/ / / / __ `__ \/ __ `/ __ `__ \/ __ \/ __ `/
/ /_/ / / / / / / /_/ / / / / / / /_/ / /_/ /
/ .___/_/ /_/ /_/\__,_/_/ /_/ /_/_.___/\__,_/
/_/
Transaction
Prefix: /builds/qt/kwant-scf/micromamba/envs/pymf-docs
Updating specs:
- python=3.11
- kwant
- myst-nb
- numpy
- scipy
- matplotlib-base
- sphinx-togglebutton
- sphinx-copybutton
- pip
- git
- make
Package Version Build Channel Size
─────────────────────────────────────────────────────────────────────────────────────────────────
Install:
─────────────────────────────────────────────────────────────────────────────────────────────────
+ _libgcc_mutex 0.1 conda_forge conda-forge 3kB
+ _openmp_mutex 4.5 2_gnu conda-forge 24kB
+ alabaster 0.7.16 pyhd8ed1ab_0 conda-forge 18kB
+ asttokens 2.4.1 pyhd8ed1ab_0 conda-forge 29kB
+ attrs 23.2.0 pyh71513ae_0 conda-forge 55kB
+ babel 2.14.0 pyhd8ed1ab_0 conda-forge 8MB
+ brotli 1.1.0 hd590300_1 conda-forge 19kB
+ brotli-bin 1.1.0 hd590300_1 conda-forge 19kB
+ brotli-python 1.1.0 py311hb755f60_1 conda-forge 351kB
+ bzip2 1.0.8 hd590300_5 conda-forge 254kB
+ c-ares 1.28.1 hd590300_0 conda-forge 169kB
+ ca-certificates 2024.2.2 hbcca054_0 conda-forge 155kB
+ certifi 2024.2.2 pyhd8ed1ab_0 conda-forge 161kB
+ charset-normalizer 3.3.2 pyhd8ed1ab_0 conda-forge 47kB
+ click 8.1.7 unix_pyh707e725_0 conda-forge 84kB
+ colorama 0.4.6 pyhd8ed1ab_0 conda-forge 25kB
+ comm 0.2.2 pyhd8ed1ab_0 conda-forge 12kB
+ contourpy 1.2.1 py311h9547e67_0 conda-forge 259kB
+ cycler 0.12.1 pyhd8ed1ab_0 conda-forge 13kB
+ debugpy 1.8.1 py311hb755f60_0 conda-forge 2MB
+ decorator 5.1.1 pyhd8ed1ab_0 conda-forge 12kB
+ docutils 0.21.2 pyhd8ed1ab_0 conda-forge 403kB
+ exceptiongroup 1.2.0 pyhd8ed1ab_2 conda-forge 21kB
+ executing 2.0.1 pyhd8ed1ab_0 conda-forge 28kB
+ fonttools 4.51.0 py311h459d7ec_0 conda-forge 3MB
+ freetype 2.12.1 h267a509_2 conda-forge 635kB
+ git 2.45.0 pl5321hef9f9f3_1 conda-forge 11MB
+ gmp 6.3.0 h59595ed_1 conda-forge 570kB
+ gmpy2 2.1.5 py311he48d604_0 conda-forge 203kB
+ greenlet 3.0.3 py311hb755f60_0 conda-forge 236kB
+ idna 3.7 pyhd8ed1ab_0 conda-forge 53kB
+ imagesize 1.4.1 pyhd8ed1ab_0 conda-forge 10kB
+ importlib-metadata 7.1.0 pyha770c72_0 conda-forge 27kB
+ importlib_metadata 7.1.0 hd8ed1ab_0 conda-forge 9kB
+ importlib_resources 6.4.0 pyhd8ed1ab_0 conda-forge 33kB
+ iniconfig 2.0.0 pyhd8ed1ab_0 conda-forge 11kB
+ ipykernel 6.29.3 pyhd33586a_0 conda-forge 119kB
+ ipython 8.22.2 pyh707e725_0 conda-forge 594kB
+ jedi 0.19.1 pyhd8ed1ab_0 conda-forge 841kB
+ jinja2 3.1.3 pyhd8ed1ab_0 conda-forge 112kB
+ jsonschema 4.22.0 pyhd8ed1ab_0 conda-forge 74kB
+ jsonschema-specifications 2023.12.1 pyhd8ed1ab_0 conda-forge 16kB
+ jupyter-cache 1.0.0 pyhd8ed1ab_0 conda-forge 31kB
+ jupyter_client 8.6.1 pyhd8ed1ab_0 conda-forge 106kB
+ jupyter_core 5.7.2 py311h38be061_0 conda-forge 95kB
+ keyutils 1.6.1 h166bdaf_0 conda-forge 118kB
+ kiwisolver 1.4.5 py311h9547e67_1 conda-forge 73kB
+ krb5 1.21.2 h659d440_0 conda-forge 1MB
+ kwant 1.4.4 nompi_py311hfed7191_102 conda-forge 1MB
+ lcms2 2.16 hb7c19ff_0 conda-forge 245kB
+ ld_impl_linux-64 2.40 h55db66e_0 conda-forge 713kB
+ lerc 4.0.0 h27087fc_0 conda-forge 282kB
+ libblas 3.9.0 22_linux64_openblas conda-forge 15kB
+ libbrotlicommon 1.1.0 hd590300_1 conda-forge 69kB
+ libbrotlidec 1.1.0 hd590300_1 conda-forge 33kB
+ libbrotlienc 1.1.0 hd590300_1 conda-forge 283kB
+ libcblas 3.9.0 22_linux64_openblas conda-forge 14kB
+ libcurl 8.7.1 hca28451_0 conda-forge 398kB
+ libdeflate 1.20 hd590300_0 conda-forge 72kB
+ libedit 3.1.20191231 he28a2e2_2 conda-forge 124kB
+ libev 4.33 hd590300_2 conda-forge 113kB
+ libexpat 2.6.2 h59595ed_0 conda-forge 74kB
+ libffi 3.4.2 h7f98852_5 conda-forge 58kB
+ libgcc-ng 13.2.0 h77fa898_6 conda-forge 778kB
+ libgfortran-ng 13.2.0 h69a702a_6 conda-forge 24kB
+ libgfortran5 13.2.0 h43f5ff8_6 conda-forge 1MB
+ libgomp 13.2.0 h77fa898_6 conda-forge 420kB
+ libiconv 1.17 hd590300_2 conda-forge 706kB
+ libjpeg-turbo 3.0.0 hd590300_1 conda-forge 619kB
+ liblapack 3.9.0 22_linux64_openblas conda-forge 14kB
+ libnghttp2 1.58.0 h47da74e_1 conda-forge 632kB
+ libnsl 2.0.1 hd590300_0 conda-forge 33kB
+ libopenblas 0.3.27 pthreads_h413a1c8_0 conda-forge 6MB
+ libpng 1.6.43 h2797004_0 conda-forge 288kB
+ libscotch 7.0.4 h91e35bf_1 conda-forge 340kB
+ libsodium 1.0.18 h36c2ea0_1 conda-forge 375kB
+ libsqlite 3.45.3 h2797004_0 conda-forge 860kB
+ libssh2 1.11.0 h0841786_0 conda-forge 271kB
+ libstdcxx-ng 13.2.0 hc0a3c3a_6 conda-forge 4MB
+ libtiff 4.6.0 h1dd3fc0_3 conda-forge 283kB
+ libuuid 2.38.1 h0b41bf4_0 conda-forge 34kB
+ libwebp-base 1.4.0 hd590300_0 conda-forge 439kB
+ libxcb 1.15 h0b41bf4_0 conda-forge 384kB
+ libxcrypt 4.4.36 hd590300_1 conda-forge 100kB
+ libzlib 1.2.13 hd590300_5 conda-forge 62kB
+ make 4.3 hd18ef5c_1 conda-forge 519kB
+ markdown-it-py 3.0.0 pyhd8ed1ab_0 conda-forge 64kB
+ markupsafe 2.1.5 py311h459d7ec_0 conda-forge 28kB
+ matplotlib-base 3.8.4 py311h54ef318_0 conda-forge 8MB
+ matplotlib-inline 0.1.7 pyhd8ed1ab_0 conda-forge 15kB
+ mdit-py-plugins 0.4.0 pyhd8ed1ab_0 conda-forge 41kB
+ mdurl 0.1.2 pyhd8ed1ab_0 conda-forge 15kB
+ metis 5.1.0 h59595ed_1007 conda-forge 4MB
+ mpc 1.3.1 hfe3b2da_0 conda-forge 116kB
+ mpfr 4.2.1 h9458935_1 conda-forge 643kB
+ mpmath 1.3.0 pyhd8ed1ab_0 conda-forge 438kB
+ mumps-include 5.6.2 ha770c72_4 conda-forge 27kB
+ mumps-seq 5.6.2 hfef103a_4 conda-forge 2MB
+ munkres 1.1.4 pyh9f0ad1d_0 conda-forge 12kB
+ myst-nb 1.1.0 pyhd8ed1ab_0 conda-forge 63kB
+ myst-parser 3.0.1 pyhd8ed1ab_0 conda-forge 72kB
+ nbclient 0.10.0 pyhd8ed1ab_0 conda-forge 28kB
+ nbformat 5.10.4 pyhd8ed1ab_0 conda-forge 101kB
+ ncurses 6.4.20240210 h59595ed_0 conda-forge 896kB
+ nest-asyncio 1.6.0 pyhd8ed1ab_0 conda-forge 12kB
+ numpy 1.26.4 py311h64a7726_0 conda-forge 8MB
+ openjpeg 2.5.2 h488ebb8_0 conda-forge 342kB
+ openssl 3.3.0 hd590300_0 conda-forge 3MB
+ packaging 24.0 pyhd8ed1ab_0 conda-forge 50kB
+ parso 0.8.4 pyhd8ed1ab_0 conda-forge 75kB
+ pcre2 10.43 hcad00b1_0 conda-forge 951kB
+ perl 5.32.1 7_hd590300_perl5 conda-forge 13MB
+ pexpect 4.9.0 pyhd8ed1ab_0 conda-forge 54kB
+ pickleshare 0.7.5 py_1003 conda-forge 9kB
+ pillow 10.3.0 py311h18e6fac_0 conda-forge 43MB
+ pip 24.0 pyhd8ed1ab_0 conda-forge 1MB
+ pkgutil-resolve-name 1.3.10 pyhd8ed1ab_1 conda-forge 11kB
+ platformdirs 4.2.1 pyhd8ed1ab_0 conda-forge 20kB
+ pluggy 1.5.0 pyhd8ed1ab_0 conda-forge 24kB
+ prompt-toolkit 3.0.42 pyha770c72_0 conda-forge 270kB
+ psutil 5.9.8 py311h459d7ec_0 conda-forge 506kB
+ pthread-stubs 0.4 h36c2ea0_1001 conda-forge 6kB
+ ptyprocess 0.7.0 pyhd3deb0d_0 conda-forge 17kB
+ pure_eval 0.2.2 pyhd8ed1ab_0 conda-forge 15kB
+ pygments 2.18.0 pyhd8ed1ab_0 conda-forge 879kB
+ pyparsing 3.1.2 pyhd8ed1ab_0 conda-forge 89kB
+ pysocks 1.7.1 pyha2e5f31_6 conda-forge 19kB
+ pytest 8.2.0 pyhd8ed1ab_0 conda-forge 257kB
+ python 3.11.9 hb806964_0_cpython conda-forge 31MB
+ python-dateutil 2.9.0 pyhd8ed1ab_0 conda-forge 223kB
+ python-fastjsonschema 2.19.1 pyhd8ed1ab_0 conda-forge 225kB
+ python_abi 3.11 4_cp311 conda-forge 6kB
+ pytz 2024.1 pyhd8ed1ab_0 conda-forge 189kB
+ pyyaml 6.0.1 py311h459d7ec_1 conda-forge 201kB
+ pyzmq 26.0.2 py311h08a0b41_0 conda-forge 474kB
+ qsymm 1.4.0 pyhd8ed1ab_0 conda-forge 71kB
+ readline 8.2 h8228510_1 conda-forge 281kB
+ referencing 0.35.1 pyhd8ed1ab_0 conda-forge 42kB
+ requests 2.31.0 pyhd8ed1ab_0 conda-forge 57kB
+ rpds-py 0.18.0 py311h46250e7_0 conda-forge 916kB
+ scipy 1.13.0 py311h517d4fd_1 conda-forge 17MB
+ scotch 7.0.4 h23d43cc_1 conda-forge 92kB
+ setuptools 69.5.1 pyhd8ed1ab_0 conda-forge 502kB
+ six 1.16.0 pyh6c4a22f_0 conda-forge 14kB
+ snowballstemmer 2.2.0 pyhd8ed1ab_0 conda-forge 59kB
+ sphinx 7.3.7 pyhd8ed1ab_0 conda-forge 1MB
+ sphinx-copybutton 0.5.2 pyhd8ed1ab_0 conda-forge 18kB
+ sphinx-togglebutton 0.3.2 pyhd8ed1ab_0 conda-forge 12kB
+ sphinxcontrib-applehelp 1.0.8 pyhd8ed1ab_0 conda-forge 30kB
+ sphinxcontrib-devhelp 1.0.6 pyhd8ed1ab_0 conda-forge 24kB
+ sphinxcontrib-htmlhelp 2.0.5 pyhd8ed1ab_0 conda-forge 33kB
+ sphinxcontrib-jsmath 1.0.1 pyhd8ed1ab_0 conda-forge 10kB
+ sphinxcontrib-qthelp 1.0.7 pyhd8ed1ab_0 conda-forge 27kB
+ sphinxcontrib-serializinghtml 1.1.10 pyhd8ed1ab_0 conda-forge 29kB
+ sqlalchemy 2.0.30 py311h331c9d8_0 conda-forge 4MB
+ stack_data 0.6.2 pyhd8ed1ab_0 conda-forge 26kB
+ sympy 1.12 pypyh9d50eac_103 conda-forge 4MB
+ tabulate 0.9.0 pyhd8ed1ab_1 conda-forge 36kB
+ tinyarray 1.2.4 py311h320fe9a_3 conda-forge 61kB
+ tk 8.6.13 noxft_h4845f30_101 conda-forge 3MB
+ tomli 2.0.1 pyhd8ed1ab_0 conda-forge 16kB
+ tornado 6.4 py311h459d7ec_0 conda-forge 853kB
+ traitlets 5.14.3 pyhd8ed1ab_0 conda-forge 110kB
+ typing-extensions 4.11.0 hd8ed1ab_0 conda-forge 10kB
+ typing_extensions 4.11.0 pyha770c72_0 conda-forge 38kB
+ tzdata 2024a h0c530f3_0 conda-forge 120kB
+ urllib3 2.2.1 pyhd8ed1ab_0 conda-forge 95kB
+ wcwidth 0.2.13 pyhd8ed1ab_0 conda-forge 33kB
+ wheel 0.43.0 pyhd8ed1ab_1 conda-forge 58kB
+ xorg-libxau 1.0.11 hd590300_0 conda-forge 14kB
+ xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge 19kB
+ xz 5.2.6 h166bdaf_0 conda-forge 418kB
+ yaml 0.2.5 h7f98852_2 conda-forge 89kB
+ zeromq 4.3.5 h75354e8_3 conda-forge 352kB
+ zipp 3.17.0 pyhd8ed1ab_0 conda-forge 19kB
+ zlib 1.2.13 hd590300_5 conda-forge 93kB
+ zstd 1.5.6 ha6fb4c9_0 conda-forge 555kB
Summary:
Install: 177 packages
Total download: 208MB
─────────────────────────────────────────────────────────────────────────────────────────────────
Transaction starting
Linking python_abi-3.11-4_cp311
Linking ca-certificates-2024.2.2-hbcca054_0
Linking mumps-include-5.6.2-ha770c72_4
Linking _libgcc_mutex-0.1-conda_forge
Linking libstdcxx-ng-13.2.0-hc0a3c3a_6
Linking ld_impl_linux-64-2.40-h55db66e_0
Linking libgomp-13.2.0-h77fa898_6
Linking _openmp_mutex-4.5-2_gnu
Linking libgcc-ng-13.2.0-h77fa898_6
Linking xorg-libxdmcp-1.1.3-h7f98852_0
Linking pthread-stubs-0.4-h36c2ea0_1001
Linking libsodium-1.0.18-h36c2ea0_1
Linking c-ares-1.28.1-hd590300_0
Linking libev-4.33-hd590300_2
Linking gmp-6.3.0-h59595ed_1
Linking metis-5.1.0-h59595ed_1007
Linking libwebp-base-1.4.0-hd590300_0
Linking libbrotlicommon-1.1.0-hd590300_1
Linking libiconv-1.17-hd590300_2
Linking libdeflate-1.20-hd590300_0
Linking lerc-4.0.0-h27087fc_0
Linking libjpeg-turbo-3.0.0-hd590300_1
Linking xorg-libxau-1.0.11-hd590300_0
Linking libxcrypt-4.4.36-hd590300_1
Linking libzlib-1.2.13-hd590300_5
Linking libffi-3.4.2-h7f98852_5
Linking bzip2-1.0.8-hd590300_5
Linking yaml-0.2.5-h7f98852_2
Linking libgfortran5-13.2.0-h43f5ff8_6
Linking make-4.3-hd18ef5c_1
Linking keyutils-1.6.1-h166bdaf_0
Linking openssl-3.3.0-hd590300_0
Linking ncurses-6.4.20240210-h59595ed_0
Linking libuuid-2.38.1-h0b41bf4_0
Linking libnsl-2.0.1-hd590300_0
Linking libexpat-2.6.2-h59595ed_0
Linking xz-5.2.6-h166bdaf_0
Linking mpfr-4.2.1-h9458935_1
Linking libbrotlienc-1.1.0-hd590300_1
Linking libbrotlidec-1.1.0-hd590300_1
Linking libxcb-1.15-h0b41bf4_0
Linking perl-5.32.1-7_hd590300_perl5
Linking zlib-1.2.13-hd590300_5
Linking zstd-1.5.6-ha6fb4c9_0
Linking libpng-1.6.43-h2797004_0
Linking tk-8.6.13-noxft_h4845f30_101
Linking libsqlite-3.45.3-h2797004_0
Linking pcre2-10.43-hcad00b1_0
Linking libgfortran-ng-13.2.0-h69a702a_6
Linking libnghttp2-1.58.0-h47da74e_1
Linking libssh2-1.11.0-h0841786_0
Linking libedit-3.1.20191231-he28a2e2_2
Linking readline-8.2-h8228510_1
Linking mpc-1.3.1-hfe3b2da_0
Linking brotli-bin-1.1.0-hd590300_1
Linking libtiff-4.6.0-h1dd3fc0_3
Linking freetype-2.12.1-h267a509_2
Linking libscotch-7.0.4-h91e35bf_1
Linking libopenblas-0.3.27-pthreads_h413a1c8_0
Linking krb5-1.21.2-h659d440_0
Linking brotli-1.1.0-hd590300_1
Linking openjpeg-2.5.2-h488ebb8_0
Linking lcms2-2.16-hb7c19ff_0
Linking scotch-7.0.4-h23d43cc_1
Linking libblas-3.9.0-22_linux64_openblas
Linking zeromq-4.3.5-h75354e8_3
Linking libcurl-8.7.1-hca28451_0
Linking libcblas-3.9.0-22_linux64_openblas
Linking liblapack-3.9.0-22_linux64_openblas
Linking git-2.45.0-pl5321hef9f9f3_1
Linking mumps-seq-5.6.2-hfef103a_4
Linking tzdata-2024a-h0c530f3_0
Linking python-3.11.9-hb806964_0_cpython
Linking wheel-0.43.0-pyhd8ed1ab_1
Linking setuptools-69.5.1-pyhd8ed1ab_0
Linking pip-24.0-pyhd8ed1ab_0
Linking sphinxcontrib-jsmath-1.0.1-pyhd8ed1ab_0
Linking parso-0.8.4-pyhd8ed1ab_0
Linking pkgutil-resolve-name-1.3.10-pyhd8ed1ab_1
Linking python-fastjsonschema-2.19.1-pyhd8ed1ab_0
Linking ptyprocess-0.7.0-pyhd3deb0d_0
Linking wcwidth-0.2.13-pyhd8ed1ab_0
Linking iniconfig-2.0.0-pyhd8ed1ab_0
Linking six-1.16.0-pyh6c4a22f_0
Linking pure_eval-0.2.2-pyhd8ed1ab_0
Linking executing-2.0.1-pyhd8ed1ab_0
Linking mpmath-1.3.0-pyhd8ed1ab_0
Linking munkres-1.1.4-pyh9f0ad1d_0
Linking platformdirs-4.2.1-pyhd8ed1ab_0
Linking pluggy-1.5.0-pyhd8ed1ab_0
Linking pyparsing-3.1.2-pyhd8ed1ab_0
Linking cycler-0.12.1-pyhd8ed1ab_0
Linking pytz-2024.1-pyhd8ed1ab_0
Linking zipp-3.17.0-pyhd8ed1ab_0
Linking nest-asyncio-1.6.0-pyhd8ed1ab_0
Linking traitlets-5.14.3-pyhd8ed1ab_0
Linking exceptiongroup-1.2.0-pyhd8ed1ab_2
Linking decorator-5.1.1-pyhd8ed1ab_0
Linking tabulate-0.9.0-pyhd8ed1ab_1
Linking click-8.1.7-unix_pyh707e725_0
Linking attrs-23.2.0-pyh71513ae_0
Linking mdurl-0.1.2-pyhd8ed1ab_0
Linking typing_extensions-4.11.0-pyha770c72_0
Linking pickleshare-0.7.5-py_1003
Linking charset-normalizer-3.3.2-pyhd8ed1ab_0
Linking pysocks-1.7.1-pyha2e5f31_6
Linking idna-3.7-pyhd8ed1ab_0
Linking certifi-2024.2.2-pyhd8ed1ab_0
Linking pygments-2.18.0-pyhd8ed1ab_0
Linking alabaster-0.7.16-pyhd8ed1ab_0
Linking tomli-2.0.1-pyhd8ed1ab_0
Linking snowballstemmer-2.2.0-pyhd8ed1ab_0
Linking packaging-24.0-pyhd8ed1ab_0
Linking imagesize-1.4.1-pyhd8ed1ab_0
Linking colorama-0.4.6-pyhd8ed1ab_0
Linking docutils-0.21.2-pyhd8ed1ab_0
Linking jedi-0.19.1-pyhd8ed1ab_0
Linking pexpect-4.9.0-pyhd8ed1ab_0
Linking prompt-toolkit-3.0.42-pyha770c72_0
Linking asttokens-2.4.1-pyhd8ed1ab_0
Linking python-dateutil-2.9.0-pyhd8ed1ab_0
Linking babel-2.14.0-pyhd8ed1ab_0
Linking importlib_resources-6.4.0-pyhd8ed1ab_0
Linking importlib-metadata-7.1.0-pyha770c72_0
Linking comm-0.2.2-pyhd8ed1ab_0
Linking matplotlib-inline-0.1.7-pyhd8ed1ab_0
Linking markdown-it-py-3.0.0-pyhd8ed1ab_0
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Transaction finished
To activate this environment, use:
micromamba activate pymf-docs
Or to execute a single command in this environment, use:
micromamba run -n pymf-docs mycommand
Installing pip packages: sphinx-book-theme>=1.1.0, sphinx-tippy, ..
Processing /builds/qt/kwant-scf
Installing build dependencies: started
Installing build dependencies: finished with status 'done'
Getting requirements to build wheel: started
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Building wheels for collected packages: pymf
Building wheel for pymf (pyproject.toml): started
Building wheel for pymf (pyproject.toml): finished with status 'done'
Created wheel for pymf: filename=pymf-0.1.dev59+gf750ade-py3-none-any.whl size=17188 sha256=4d15b17bb1b5943b57c20bd4b1d53bbe25704d147e282bba28d96313ec8da907
Stored in directory: /home/mambauser/.cache/pip/wheels/5b/06/10/8869722029570f6f33627b817da751714f487bfb77cdb04f2f
Successfully built pymf
Installing collected packages: soupsieve, accessible-pygments, pymf, beautifulsoup4, sphinx-tippy, pydata-sphinx-theme, sphinx-book-theme
Successfully installed accessible-pygments-0.0.4 beautifulsoup4-4.12.3 pydata-sphinx-theme-0.15.2 pymf-0.1.dev59+gf750ade soupsieve-2.5 sphinx-book-theme-1.1.2 sphinx-tippy-0.4.3
[32;1m$ eval "$(micromamba shell hook --shell bash)"[0;m
[32;1m$ micromamba activate pymf-docs[0;m
[32;1m$ make -C docs/ html SPHINXOPTS="-WT --keep-going -n"[0;m
make: Entering directory '/builds/qt/kwant-scf/docs'
Running Sphinx v7.3.7
making output directory... done
[autosummary] generating autosummary for: documentation/pymf.md, index.md, mf_details.md, mf_notes.md
loading intersphinx inventory from https://docs.python.org/3/objects.inv...
loading intersphinx inventory from https://kwant-project.org/doc/1/objects.inv...
loading intersphinx inventory from https://numpy.org/doc/stable/objects.inv...
loading intersphinx inventory from https://docs.scipy.org/doc/scipy/objects.inv...
loading intersphinx inventory from https://docs.sympy.org/latest/objects.inv...
myst v3.0.1: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions={'amsmath', 'colon_fence', 'substitution', 'dollarmath'}, disable_syntax=[], all_links_external=False, links_external_new_tab=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=0, heading_slug_func=None, html_meta={}, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True)
myst-nb v1.1.0: NbParserConfig(custom_formats={}, metadata_key='mystnb', cell_metadata_key='mystnb', kernel_rgx_aliases={}, eval_name_regex='^[a-zA-Z_][a-zA-Z0-9_]*$', execution_mode='auto', execution_cache_path='', execution_excludepatterns=(), execution_timeout=120, execution_in_temp=False, execution_allow_errors=False, execution_raise_on_error=True, execution_show_tb=False, merge_streams=False, render_plugin='default', remove_code_source=False, remove_code_outputs=False, code_prompt_show='Show code cell {type}', code_prompt_hide='Hide code cell {type}', number_source_lines=False, output_stderr='show', render_text_lexer='myst-ansi', render_error_lexer='ipythontb', render_image_options={}, render_figure_options={}, render_markdown_format='commonmark', output_folder='build', append_css=True, metadata_to_fm=False)
Using jupyter-cache at: /builds/qt/kwant-scf/docs/build/.jupyter_cache
The default value for `navigation_with_keys` will change to `False` in the next release. If you wish to preserve the old behavior for your site, set `navigation_with_keys=True` in the `html_theme_options` dict in your `conf.py` file. Be aware that `navigation_with_keys = True` has negative accessibility implications: https://github.com/pydata/pydata-sphinx-theme/issues/1492
building [mo]: targets for 0 po files that are out of date
writing output...
building [html]: targets for 4 source files that are out of date
updating environment: [new config] 4 added, 0 changed, 0 removed
reading sources... [ 25%] documentation/pymf
reading sources... [ 50%] index
/builds/qt/kwant-scf/docs/source/index.md: Skipped execution in 'auto' mode (all outputs present) [mystnb]
reading sources... [ 75%] mf_details
reading sources... [100%] mf_notes
looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
copying assets... copying static files... done
copying extra files... done
done
writing output... [ 25%] documentation/pymf
writing output... [ 50%] index
writing output... [ 75%] mf_details
writing output... [100%] mf_notes
generating indices... genindex py-modindex done
highlighting module code... [100%] pymf.mf
writing additional pages... search done
dumping search index in English (code: en)... done
dumping object inventory... done
Fetching Wikipedia tips
Fetching DOI tips
Fetching RTD tips
Writing tippy data files[ 25%] documentation/pymf
Writing tippy data files[ 50%] index
Writing tippy data files[ 75%] mf_details
Writing tippy data files[100%] mf_notes
build succeeded.
The HTML pages are in build/html.
make: Leaving directory '/builds/qt/kwant-scf/docs'
section_end:1714998204:step_script
[0Ksection_start:1714998204:upload_artifacts_on_success
[0K[0K[36;1mUploading artifacts for successful job[0;m[0;m
[32;1mUploading artifacts...[0;m
docs/build: found 282 matching files and directories[0;m
Uploading artifacts as "archive" to coordinator... 201 Created[0;m id[0;m=422756 responseStatus[0;m=201 Created token[0;m=glcbt-64
section_end:1714998209:upload_artifacts_on_success
[0Ksection_start:1714998209:cleanup_file_variables
[0K[0K[36;1mCleaning up project directory and file based variables[0;m[0;m
section_end:1714998212:cleanup_file_variables
[0K[32;1mJob succeeded[0;m