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This is an archived project. Repository and other project resources are read-only.
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Quantum Tinkerer
adaptive
Commits
8b0c5472
Commit
8b0c5472
authored
6 years ago
by
Jorn Hoofwijk
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also add an isoline feature
parent
dff5c5d9
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adaptive/learner/learnerND.py
+101
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adaptive/learner/learnerND.py
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and
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adaptive/learner/learnerND.py
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View file @
8b0c5472
...
...
@@ -463,6 +463,10 @@ class LearnerND(BaseLearner):
self
.
_subtriangulations
=
dict
()
self
.
_pending_to_simplex
=
dict
()
##########################
# Plotting related stuff #
##########################
def
plot
(
self
,
n
=
None
,
tri_alpha
=
0
):
"""
Plot the function we want to learn, only works in 2D.
...
...
@@ -639,6 +643,103 @@ class LearnerND(BaseLearner):
)
return
vertices
,
faces
def
_get_isoline
(
self
,
level
=
0.0
):
# Very similar to _get_isosurface, maybe merge the two functions
if
self
.
ndim
!=
2
or
self
.
vdim
!=
1
:
raise
Exception
(
'
Isoline plotting is only supported
'
'
for a 2D input and 1D output
'
)
vertices
=
[]
# index -> (x,y,z)
lines
=
[]
# tuple of indices of the corner points
from_line_to_vertex
=
{}
# the interpolated vertex (index) between two known points
def
_get_vertex_index
(
a
,
b
):
if
(
a
,
b
)
in
from_line_to_vertex
:
return
from_line_to_vertex
[(
a
,
b
)]
# Otherwise compute it and cache the result.
vertex_a
=
self
.
tri
.
vertices
[
a
]
vertex_b
=
self
.
tri
.
vertices
[
b
]
value_a
=
self
.
data
[
vertex_a
]
value_b
=
self
.
data
[
vertex_b
]
da
=
abs
(
value_a
-
level
)
db
=
abs
(
value_b
-
level
)
dab
=
da
+
db
new_pt
=
(
db
/
dab
*
np
.
array
(
vertex_a
)
+
da
/
dab
*
np
.
array
(
vertex_b
))
new_index
=
len
(
vertices
)
vertices
.
append
(
new_pt
)
from_line_to_vertex
[(
a
,
b
)]
=
new_index
return
new_index
for
simplex
in
self
.
tri
.
simplices
:
line
=
[]
for
a
,
b
in
itertools
.
combinations
(
simplex
,
2
):
va
=
self
.
data
[
self
.
tri
.
vertices
[
a
]]
vb
=
self
.
data
[
self
.
tri
.
vertices
[
b
]]
if
min
(
va
,
vb
)
<
level
<=
max
(
va
,
vb
):
vi
=
_get_vertex_index
(
a
,
b
)
should_add
=
True
for
pi
in
line
:
if
np
.
allclose
(
vertices
[
vi
],
vertices
[
pi
]):
should_add
=
False
if
should_add
:
line
.
append
(
vi
)
if
len
(
line
)
==
2
:
lines
.
append
(
line
)
if
len
(
lines
)
==
0
:
r_min
=
min
(
self
.
data
[
v
]
for
v
in
self
.
tri
.
vertices
)
r_max
=
max
(
self
.
data
[
v
]
for
v
in
self
.
tri
.
vertices
)
raise
ValueError
(
f
"
Could not draw isosurface for level=
{
level
}
, as
"
"
this value is not inside the function range. Please choose
"
f
"
a level strictly inside interval (
{
r_min
}
,
{
r_max
}
)
"
)
return
vertices
,
lines
def
plot_isoline
(
self
,
level
=
0.0
,
n
=
None
):
"""
Plot the isoline at a specific level of the function we want to
learn, only works in 2D.
Parameters
----------
level : float
the value of the function at which you would like to see the isoline
n : int
the number of boxes in the interpolation grid along each axis
"""
hv
=
ensure_holoviews
()
vertices
,
lines
=
self
.
_get_isoline
(
level
)
paths
=
[[
vertices
[
i
],
vertices
[
j
]]
for
i
,
j
in
lines
]
contour
=
hv
.
Path
(
paths
)
x
,
y
=
self
.
bounds
lbrt
=
x
[
0
],
y
[
0
],
x
[
1
],
y
[
1
]
if
n
is
None
:
# Calculate how many grid points are needed.
# factor from A=√3/4 * a² (equilateral triangle)
n
=
int
(
0.658
/
np
.
sqrt
(
np
.
min
(
self
.
tri
.
volumes
())))
xs
=
ys
=
np
.
linspace
(
0
,
1
,
n
)
xs
=
xs
*
(
x
[
1
]
-
x
[
0
])
+
x
[
0
]
ys
=
ys
*
(
y
[
1
]
-
y
[
0
])
+
y
[
0
]
z
=
self
.
ip
()(
xs
[:,
None
],
ys
[
None
,
:]).
squeeze
()
im
=
hv
.
Image
(
np
.
rot90
(
z
),
bounds
=
lbrt
)
im_opts
=
dict
(
cmap
=
'
viridis
'
)
contour_opts
=
dict
(
color
=
'
black
'
)
return
im
.
opts
(
style
=
im_opts
)
*
contour
.
opts
(
style
=
contour_opts
)
def
plot_isosurface
(
self
,
level
=
0.0
,
hull_opacity
=
0.2
):
"""
Plots the linearly interpolated isosurface of the function,
...
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