Builder fixes

Address issues related to interfacing with kwant, such as qt/kwant-scf#10 and qt/kwant-scf#9.

meanfi/tests/test_kwant.py

@@ -23,17 +23,17 @@ def test_kwant_conversion(seed):
     # set a dummy lattice to read sites from
     lattice = kwant.lattice.general(
         np.random.rand(ndim, ndim),
-        basis=np.random.rand(np.random.randint(1, 5), ndim),
+        basis=np.random.rand(sites_in_cell, ndim),
         norbs=ndof_per_site,
     )
 
-    dummy_tb = kwant.Builder(
-        kwant.TranslationalSymmetry(*n_cells * lattice.prim_vecs)
-    )
+    dummy_tb = kwant.Builder(kwant.TranslationalSymmetry(*n_cells * lattice.prim_vecs))
     for site in range(sites_in_cell):
-        dummy_tb[lattice(site, *[0 for _ in range(ndim - 1)])] = (
-            np.eye(ndof_per_site) * 2
-        )
+        for sublattice in lattice.sublattices:
+            for n in range(n_cells):
+                dummy_tb[sublattice(site, *[n for _ in range(ndim - 1)])] = (
+                    np.eye(sum(ndof_per_site)) * 2
+                )
 
     # generate random and generate builder from it
     random_tb = guess_tb(keyList, sum(ndof_per_site) * sites_in_cell * n_cells)