run tests
Passed Started
by
@JohannaZijderveld

Johanna Zijderveld
1Running with gitlab-runner 15.4.0 (43b2dc3d)2 on universal-tn4 d3cf99854Using Docker executor with image mambaorg/micromamba:1.4.3 ...5Authenticating with credentials from /root/.docker/config.json6Pulling docker image mambaorg/micromamba:1.4.3 ...7Using docker image sha256:bcfdda4930c6becbd40d3a8eb6d835e4d2275d16767fdd5000a25507d1c56b02 for mambaorg/micromamba:1.4.3 with digest mambaorg/micromamba@sha256:25b00e28c39abc2e698943c2279fa865d0ec7c97891c7faecafb5c6417313e71 ...9Running on runner-d3cf9985-project-3642-concurrent-0 via tnw-tn4.tudelft.net...11Fetching changes with git depth set to 20...12Reinitialized existing Git repository in /builds/qt/kwant-scf/.git/13Checking out 9ccbf04d as examples...14Removing docs/build/15Removing htmlcov/16Removing memoryProfile.bin17Removing micromamba/18Removing public/19Removing pymf/_version.py20Removing timeProfile.html21Skipping Git submodules setup23Using docker image sha256:bcfdda4930c6becbd40d3a8eb6d835e4d2275d16767fdd5000a25507d1c56b02 for mambaorg/micromamba:1.4.3 with digest mambaorg/micromamba@sha256:25b00e28c39abc2e698943c2279fa865d0ec7c97891c7faecafb5c6417313e71 ...24$ mkdir -p micromamba25$ export MAMBA_ROOT_PREFIX=micromamba26$ micromamba create -yf docs/environment.yml27 __28 __ ______ ___ ____ _____ ___ / /_ ____ _29 / / / / __ `__ \/ __ `/ __ `__ \/ __ \/ __ `/30 / /_/ / / / / / / /_/ / / / / / / /_/ / /_/ /31 / .___/_/ /_/ /_/\__,_/_/ /_/ /_/_.___/\__,_/32 /_/33Transaction34 Prefix: /builds/qt/kwant-scf/micromamba/envs/pymf-docs35 Updating specs:36 - python=3.1137 - kwant38 - myst-nb39 - numpy40 - scipy41 - matplotlib-base42 - sphinx-togglebutton43 - sphinx-copybutton44 - pip45 - git46 - make47 Package Version Build Channel Size48─────────────────────────────────────────────────────────────────────────────────────────────────49 Install:50─────────────────────────────────────────────────────────────────────────────────────────────────51 + _libgcc_mutex 0.1 conda_forge conda-forge 3kB52 + _openmp_mutex 4.5 2_gnu conda-forge 24kB53 + alabaster 0.7.16 pyhd8ed1ab_0 conda-forge 18kB54 + asttokens 2.4.1 pyhd8ed1ab_0 conda-forge 29kB55 + attrs 23.2.0 pyh71513ae_0 conda-forge 55kB56 + babel 2.14.0 pyhd8ed1ab_0 conda-forge 8MB57 + brotli 1.1.0 hd590300_1 conda-forge 19kB58 + brotli-bin 1.1.0 hd590300_1 conda-forge 19kB59 + brotli-python 1.1.0 py311hb755f60_1 conda-forge 351kB60 + bzip2 1.0.8 hd590300_5 conda-forge 254kB61 + c-ares 1.28.1 hd590300_0 conda-forge 169kB62 + ca-certificates 2024.2.2 hbcca054_0 conda-forge 155kB63 + certifi 2024.2.2 pyhd8ed1ab_0 conda-forge 161kB64 + charset-normalizer 3.3.2 pyhd8ed1ab_0 conda-forge 47kB65 + click 8.1.7 unix_pyh707e725_0 conda-forge 84kB66 + colorama 0.4.6 pyhd8ed1ab_0 conda-forge 25kB67 + comm 0.2.2 pyhd8ed1ab_0 conda-forge 12kB68 + contourpy 1.2.1 py311h9547e67_0 conda-forge 259kB69 + cycler 0.12.1 pyhd8ed1ab_0 conda-forge 13kB70 + debugpy 1.8.1 py311hb755f60_0 conda-forge 2MB71 + decorator 5.1.1 pyhd8ed1ab_0 conda-forge 12kB72 + docutils 0.21.2 pyhd8ed1ab_0 conda-forge 403kB73 + exceptiongroup 1.2.0 pyhd8ed1ab_2 conda-forge 21kB74 + executing 2.0.1 pyhd8ed1ab_0 conda-forge 28kB75 + fonttools 4.51.0 py311h459d7ec_0 conda-forge 3MB76 + freetype 2.12.1 h267a509_2 conda-forge 635kB77 + git 2.45.0 pl5321hef9f9f3_1 conda-forge 11MB78 + gmp 6.3.0 h59595ed_1 conda-forge 570kB79 + gmpy2 2.1.5 py311he48d604_0 conda-forge 203kB80 + greenlet 3.0.3 py311hb755f60_0 conda-forge 236kB81 + idna 3.7 pyhd8ed1ab_0 conda-forge 53kB82 + imagesize 1.4.1 pyhd8ed1ab_0 conda-forge 10kB83 + importlib-metadata 7.1.0 pyha770c72_0 conda-forge 27kB84 + importlib_metadata 7.1.0 hd8ed1ab_0 conda-forge 9kB85 + importlib_resources 6.4.0 pyhd8ed1ab_0 conda-forge 33kB86 + iniconfig 2.0.0 pyhd8ed1ab_0 conda-forge 11kB87 + ipykernel 6.29.3 pyhd33586a_0 conda-forge 119kB88 + ipython 8.22.2 pyh707e725_0 conda-forge 594kB89 + jedi 0.19.1 pyhd8ed1ab_0 conda-forge 841kB90 + jinja2 3.1.3 pyhd8ed1ab_0 conda-forge 112kB91 + jsonschema 4.22.0 pyhd8ed1ab_0 conda-forge 74kB92 + jsonschema-specifications 2023.12.1 pyhd8ed1ab_0 conda-forge 16kB93 + jupyter-cache 1.0.0 pyhd8ed1ab_0 conda-forge 31kB94 + jupyter_client 8.6.1 pyhd8ed1ab_0 conda-forge 106kB95 + jupyter_core 5.7.2 py311h38be061_0 conda-forge 95kB96 + keyutils 1.6.1 h166bdaf_0 conda-forge 118kB97 + kiwisolver 1.4.5 py311h9547e67_1 conda-forge 73kB98 + krb5 1.21.2 h659d440_0 conda-forge 1MB99 + kwant 1.4.4 nompi_py311hfed7191_102 conda-forge 1MB100 + lcms2 2.16 hb7c19ff_0 conda-forge 245kB101 + ld_impl_linux-64 2.40 h55db66e_0 conda-forge 713kB102 + lerc 4.0.0 h27087fc_0 conda-forge 282kB103 + libblas 3.9.0 22_linux64_openblas conda-forge 15kB104 + libbrotlicommon 1.1.0 hd590300_1 conda-forge 69kB105 + libbrotlidec 1.1.0 hd590300_1 conda-forge 33kB106 + libbrotlienc 1.1.0 hd590300_1 conda-forge 283kB107 + libcblas 3.9.0 22_linux64_openblas conda-forge 14kB108 + libcurl 8.7.1 hca28451_0 conda-forge 398kB109 + libdeflate 1.20 hd590300_0 conda-forge 72kB110 + libedit 3.1.20191231 he28a2e2_2 conda-forge 124kB111 + libev 4.33 hd590300_2 conda-forge 113kB112 + libexpat 2.6.2 h59595ed_0 conda-forge 74kB113 + libffi 3.4.2 h7f98852_5 conda-forge 58kB114 + libgcc-ng 13.2.0 h77fa898_6 conda-forge 778kB115 + libgfortran-ng 13.2.0 h69a702a_6 conda-forge 24kB116 + libgfortran5 13.2.0 h43f5ff8_6 conda-forge 1MB117 + libgomp 13.2.0 h77fa898_6 conda-forge 420kB118 + libiconv 1.17 hd590300_2 conda-forge 706kB119 + libjpeg-turbo 3.0.0 hd590300_1 conda-forge 619kB120 + liblapack 3.9.0 22_linux64_openblas conda-forge 14kB121 + libnghttp2 1.58.0 h47da74e_1 conda-forge 632kB122 + libnsl 2.0.1 hd590300_0 conda-forge 33kB123 + libopenblas 0.3.27 pthreads_h413a1c8_0 conda-forge 6MB124 + libpng 1.6.43 h2797004_0 conda-forge 288kB125 + libscotch 7.0.4 h91e35bf_1 conda-forge 340kB126 + libsodium 1.0.18 h36c2ea0_1 conda-forge 375kB127 + libsqlite 3.45.3 h2797004_0 conda-forge 860kB128 + libssh2 1.11.0 h0841786_0 conda-forge 271kB129 + libstdcxx-ng 13.2.0 hc0a3c3a_6 conda-forge 4MB130 + libtiff 4.6.0 h1dd3fc0_3 conda-forge 283kB131 + libuuid 2.38.1 h0b41bf4_0 conda-forge 34kB132 + libwebp-base 1.4.0 hd590300_0 conda-forge 439kB133 + libxcb 1.15 h0b41bf4_0 conda-forge 384kB134 + libxcrypt 4.4.36 hd590300_1 conda-forge 100kB135 + libzlib 1.2.13 hd590300_5 conda-forge 62kB136 + make 4.3 hd18ef5c_1 conda-forge 519kB137 + markdown-it-py 3.0.0 pyhd8ed1ab_0 conda-forge 64kB138 + markupsafe 2.1.5 py311h459d7ec_0 conda-forge 28kB139 + matplotlib-base 3.8.4 py311h54ef318_0 conda-forge 8MB140 + matplotlib-inline 0.1.7 pyhd8ed1ab_0 conda-forge 15kB141 + mdit-py-plugins 0.4.0 pyhd8ed1ab_0 conda-forge 41kB142 + mdurl 0.1.2 pyhd8ed1ab_0 conda-forge 15kB143 + metis 5.1.0 h59595ed_1007 conda-forge 4MB144 + mpc 1.3.1 hfe3b2da_0 conda-forge 116kB145 + mpfr 4.2.1 h9458935_1 conda-forge 643kB146 + mpmath 1.3.0 pyhd8ed1ab_0 conda-forge 438kB147 + mumps-include 5.6.2 ha770c72_4 conda-forge 27kB148 + mumps-seq 5.6.2 hfef103a_4 conda-forge 2MB149 + munkres 1.1.4 pyh9f0ad1d_0 conda-forge 12kB150 + myst-nb 1.1.0 pyhd8ed1ab_0 conda-forge 63kB151 + myst-parser 3.0.1 pyhd8ed1ab_0 conda-forge 72kB152 + nbclient 0.10.0 pyhd8ed1ab_0 conda-forge 28kB153 + nbformat 5.10.4 pyhd8ed1ab_0 conda-forge 101kB154 + ncurses 6.4.20240210 h59595ed_0 conda-forge 896kB155 + nest-asyncio 1.6.0 pyhd8ed1ab_0 conda-forge 12kB156 + numpy 1.26.4 py311h64a7726_0 conda-forge 8MB157 + openjpeg 2.5.2 h488ebb8_0 conda-forge 342kB158 + openssl 3.3.0 hd590300_0 conda-forge 3MB159 + packaging 24.0 pyhd8ed1ab_0 conda-forge 50kB160 + parso 0.8.4 pyhd8ed1ab_0 conda-forge 75kB161 + pcre2 10.43 hcad00b1_0 conda-forge 951kB162 + perl 5.32.1 7_hd590300_perl5 conda-forge 13MB163 + pexpect 4.9.0 pyhd8ed1ab_0 conda-forge 54kB164 + pickleshare 0.7.5 py_1003 conda-forge 9kB165 + pillow 10.3.0 py311h18e6fac_0 conda-forge 43MB166 + pip 24.0 pyhd8ed1ab_0 conda-forge 1MB167 + pkgutil-resolve-name 1.3.10 pyhd8ed1ab_1 conda-forge 11kB168 + platformdirs 4.2.1 pyhd8ed1ab_0 conda-forge 20kB169 + pluggy 1.5.0 pyhd8ed1ab_0 conda-forge 24kB170 + prompt-toolkit 3.0.42 pyha770c72_0 conda-forge 270kB171 + psutil 5.9.8 py311h459d7ec_0 conda-forge 506kB172 + pthread-stubs 0.4 h36c2ea0_1001 conda-forge 6kB173 + ptyprocess 0.7.0 pyhd3deb0d_0 conda-forge 17kB174 + pure_eval 0.2.2 pyhd8ed1ab_0 conda-forge 15kB175 + pygments 2.18.0 pyhd8ed1ab_0 conda-forge 879kB176 + pyparsing 3.1.2 pyhd8ed1ab_0 conda-forge 89kB177 + pysocks 1.7.1 pyha2e5f31_6 conda-forge 19kB178 + pytest 8.2.0 pyhd8ed1ab_0 conda-forge 257kB179 + python 3.11.9 hb806964_0_cpython conda-forge 31MB180 + python-dateutil 2.9.0 pyhd8ed1ab_0 conda-forge 223kB181 + python-fastjsonschema 2.19.1 pyhd8ed1ab_0 conda-forge 225kB182 + python_abi 3.11 4_cp311 conda-forge 6kB183 + pytz 2024.1 pyhd8ed1ab_0 conda-forge 189kB184 + pyyaml 6.0.1 py311h459d7ec_1 conda-forge 201kB185 + pyzmq 26.0.2 py311h08a0b41_0 conda-forge 474kB186 + qsymm 1.4.0 pyhd8ed1ab_0 conda-forge 71kB187 + readline 8.2 h8228510_1 conda-forge 281kB188 + referencing 0.35.1 pyhd8ed1ab_0 conda-forge 42kB189 + requests 2.31.0 pyhd8ed1ab_0 conda-forge 57kB190 + rpds-py 0.18.0 py311h46250e7_0 conda-forge 916kB191 + scipy 1.13.0 py311h517d4fd_1 conda-forge 17MB192 + scotch 7.0.4 h23d43cc_1 conda-forge 92kB193 + setuptools 69.5.1 pyhd8ed1ab_0 conda-forge 502kB194 + six 1.16.0 pyh6c4a22f_0 conda-forge 14kB195 + snowballstemmer 2.2.0 pyhd8ed1ab_0 conda-forge 59kB196 + sphinx 7.3.7 pyhd8ed1ab_0 conda-forge 1MB197 + sphinx-copybutton 0.5.2 pyhd8ed1ab_0 conda-forge 18kB198 + sphinx-togglebutton 0.3.2 pyhd8ed1ab_0 conda-forge 12kB199 + sphinxcontrib-applehelp 1.0.8 pyhd8ed1ab_0 conda-forge 30kB200 + sphinxcontrib-devhelp 1.0.6 pyhd8ed1ab_0 conda-forge 24kB201 + sphinxcontrib-htmlhelp 2.0.5 pyhd8ed1ab_0 conda-forge 33kB202 + sphinxcontrib-jsmath 1.0.1 pyhd8ed1ab_0 conda-forge 10kB203 + sphinxcontrib-qthelp 1.0.7 pyhd8ed1ab_0 conda-forge 27kB204 + sphinxcontrib-serializinghtml 1.1.10 pyhd8ed1ab_0 conda-forge 29kB205 + sqlalchemy 2.0.29 py311h459d7ec_0 conda-forge 4MB206 + stack_data 0.6.2 pyhd8ed1ab_0 conda-forge 26kB207 + sympy 1.12 pypyh9d50eac_103 conda-forge 4MB208 + tabulate 0.9.0 pyhd8ed1ab_1 conda-forge 36kB209 + tinyarray 1.2.4 py311h320fe9a_3 conda-forge 61kB210 + tk 8.6.13 noxft_h4845f30_101 conda-forge 3MB211 + tomli 2.0.1 pyhd8ed1ab_0 conda-forge 16kB212 + tornado 6.4 py311h459d7ec_0 conda-forge 853kB213 + traitlets 5.14.3 pyhd8ed1ab_0 conda-forge 110kB214 + typing-extensions 4.11.0 hd8ed1ab_0 conda-forge 10kB215 + typing_extensions 4.11.0 pyha770c72_0 conda-forge 38kB216 + tzdata 2024a h0c530f3_0 conda-forge 120kB217 + urllib3 2.2.1 pyhd8ed1ab_0 conda-forge 95kB218 + wcwidth 0.2.13 pyhd8ed1ab_0 conda-forge 33kB219 + wheel 0.43.0 pyhd8ed1ab_1 conda-forge 58kB220 + xorg-libxau 1.0.11 hd590300_0 conda-forge 14kB221 + xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge 19kB222 + xz 5.2.6 h166bdaf_0 conda-forge 418kB223 + yaml 0.2.5 h7f98852_2 conda-forge 89kB224 + zeromq 4.3.5 h75354e8_3 conda-forge 352kB225 + zipp 3.17.0 pyhd8ed1ab_0 conda-forge 19kB226 + zlib 1.2.13 hd590300_5 conda-forge 93kB227 + zstd 1.5.6 ha6fb4c9_0 conda-forge 555kB228 Summary:229 Install: 177 packages230 Total download: 208MB231─────────────────────────────────────────────────────────────────────────────────────────────────232Transaction starting233Linking python_abi-3.11-4_cp311234Linking ca-certificates-2024.2.2-hbcca054_0235Linking mumps-include-5.6.2-ha770c72_4236Linking _libgcc_mutex-0.1-conda_forge237Linking libstdcxx-ng-13.2.0-hc0a3c3a_6238Linking ld_impl_linux-64-2.40-h55db66e_0239Linking libgomp-13.2.0-h77fa898_6240Linking _openmp_mutex-4.5-2_gnu241Linking libgcc-ng-13.2.0-h77fa898_6242Linking xorg-libxdmcp-1.1.3-h7f98852_0243Linking pthread-stubs-0.4-h36c2ea0_1001244Linking libsodium-1.0.18-h36c2ea0_1245Linking c-ares-1.28.1-hd590300_0246Linking libev-4.33-hd590300_2247Linking gmp-6.3.0-h59595ed_1248Linking metis-5.1.0-h59595ed_1007249Linking libwebp-base-1.4.0-hd590300_0250Linking libbrotlicommon-1.1.0-hd590300_1251Linking libiconv-1.17-hd590300_2252Linking libdeflate-1.20-hd590300_0253Linking lerc-4.0.0-h27087fc_0254Linking libjpeg-turbo-3.0.0-hd590300_1255Linking xorg-libxau-1.0.11-hd590300_0256Linking libxcrypt-4.4.36-hd590300_1257Linking libzlib-1.2.13-hd590300_5258Linking libffi-3.4.2-h7f98852_5259Linking bzip2-1.0.8-hd590300_5260Linking yaml-0.2.5-h7f98852_2261Linking libgfortran5-13.2.0-h43f5ff8_6262Linking make-4.3-hd18ef5c_1263Linking keyutils-1.6.1-h166bdaf_0264Linking openssl-3.3.0-hd590300_0265Linking ncurses-6.4.20240210-h59595ed_0266Linking libuuid-2.38.1-h0b41bf4_0267Linking libnsl-2.0.1-hd590300_0268Linking libexpat-2.6.2-h59595ed_0269Linking xz-5.2.6-h166bdaf_0270Linking mpfr-4.2.1-h9458935_1271Linking libbrotlienc-1.1.0-hd590300_1272Linking libbrotlidec-1.1.0-hd590300_1273Linking libxcb-1.15-h0b41bf4_0274Linking perl-5.32.1-7_hd590300_perl5275Linking zlib-1.2.13-hd590300_5276Linking zstd-1.5.6-ha6fb4c9_0277Linking libpng-1.6.43-h2797004_0278Linking tk-8.6.13-noxft_h4845f30_101279Linking libsqlite-3.45.3-h2797004_0280Linking pcre2-10.43-hcad00b1_0281Linking libgfortran-ng-13.2.0-h69a702a_6282Linking libnghttp2-1.58.0-h47da74e_1283Linking libssh2-1.11.0-h0841786_0284Linking libedit-3.1.20191231-he28a2e2_2285Linking readline-8.2-h8228510_1286Linking mpc-1.3.1-hfe3b2da_0287Linking brotli-bin-1.1.0-hd590300_1288Linking libtiff-4.6.0-h1dd3fc0_3289Linking freetype-2.12.1-h267a509_2290Linking libscotch-7.0.4-h91e35bf_1291Linking libopenblas-0.3.27-pthreads_h413a1c8_0292Linking krb5-1.21.2-h659d440_0293Linking brotli-1.1.0-hd590300_1294Linking openjpeg-2.5.2-h488ebb8_0295Linking lcms2-2.16-hb7c19ff_0296Linking scotch-7.0.4-h23d43cc_1297Linking libblas-3.9.0-22_linux64_openblas298Linking zeromq-4.3.5-h75354e8_3299Linking libcurl-8.7.1-hca28451_0300Linking libcblas-3.9.0-22_linux64_openblas301Linking liblapack-3.9.0-22_linux64_openblas302Linking git-2.45.0-pl5321hef9f9f3_1303Linking mumps-seq-5.6.2-hfef103a_4304Linking tzdata-2024a-h0c530f3_0305Linking python-3.11.9-hb806964_0_cpython306Linking wheel-0.43.0-pyhd8ed1ab_1307Linking setuptools-69.5.1-pyhd8ed1ab_0308Linking pip-24.0-pyhd8ed1ab_0309Linking sphinxcontrib-jsmath-1.0.1-pyhd8ed1ab_0310Linking parso-0.8.4-pyhd8ed1ab_0311Linking pkgutil-resolve-name-1.3.10-pyhd8ed1ab_1312Linking python-fastjsonschema-2.19.1-pyhd8ed1ab_0313Linking ptyprocess-0.7.0-pyhd3deb0d_0314Linking wcwidth-0.2.13-pyhd8ed1ab_0315Linking iniconfig-2.0.0-pyhd8ed1ab_0316Linking six-1.16.0-pyh6c4a22f_0317Linking pure_eval-0.2.2-pyhd8ed1ab_0318Linking executing-2.0.1-pyhd8ed1ab_0319Linking mpmath-1.3.0-pyhd8ed1ab_0320Linking munkres-1.1.4-pyh9f0ad1d_0321Linking platformdirs-4.2.1-pyhd8ed1ab_0322Linking pluggy-1.5.0-pyhd8ed1ab_0323Linking pyparsing-3.1.2-pyhd8ed1ab_0324Linking cycler-0.12.1-pyhd8ed1ab_0325Linking pytz-2024.1-pyhd8ed1ab_0326Linking zipp-3.17.0-pyhd8ed1ab_0327Linking nest-asyncio-1.6.0-pyhd8ed1ab_0328Linking traitlets-5.14.3-pyhd8ed1ab_0329Linking exceptiongroup-1.2.0-pyhd8ed1ab_2330Linking decorator-5.1.1-pyhd8ed1ab_0331Linking tabulate-0.9.0-pyhd8ed1ab_1332Linking click-8.1.7-unix_pyh707e725_0333Linking attrs-23.2.0-pyh71513ae_0334Linking mdurl-0.1.2-pyhd8ed1ab_0335Linking typing_extensions-4.11.0-pyha770c72_0336Linking pickleshare-0.7.5-py_1003337Linking charset-normalizer-3.3.2-pyhd8ed1ab_0338Linking pysocks-1.7.1-pyha2e5f31_6339Linking idna-3.7-pyhd8ed1ab_0340Linking certifi-2024.2.2-pyhd8ed1ab_0341Linking pygments-2.18.0-pyhd8ed1ab_0342Linking alabaster-0.7.16-pyhd8ed1ab_0343Linking tomli-2.0.1-pyhd8ed1ab_0344Linking snowballstemmer-2.2.0-pyhd8ed1ab_0345Linking packaging-24.0-pyhd8ed1ab_0346Linking imagesize-1.4.1-pyhd8ed1ab_0347Linking colorama-0.4.6-pyhd8ed1ab_0348Linking docutils-0.21.2-pyhd8ed1ab_0349Linking jedi-0.19.1-pyhd8ed1ab_0350Linking pexpect-4.9.0-pyhd8ed1ab_0351Linking prompt-toolkit-3.0.42-pyha770c72_0352Linking asttokens-2.4.1-pyhd8ed1ab_0353Linking python-dateutil-2.9.0-pyhd8ed1ab_0354Linking babel-2.14.0-pyhd8ed1ab_0355Linking importlib_resources-6.4.0-pyhd8ed1ab_0356Linking importlib-metadata-7.1.0-pyha770c72_0357Linking comm-0.2.2-pyhd8ed1ab_0358Linking matplotlib-inline-0.1.7-pyhd8ed1ab_0359Linking markdown-it-py-3.0.0-pyhd8ed1ab_0360Linking typing-extensions-4.11.0-hd8ed1ab_0361Linking pytest-8.2.0-pyhd8ed1ab_0362Linking stack_data-0.6.2-pyhd8ed1ab_0363Linking importlib_metadata-7.1.0-hd8ed1ab_0364Linking mdit-py-plugins-0.4.0-pyhd8ed1ab_0365Linking ipython-8.22.2-pyh707e725_0366Linking rpds-py-0.18.0-py311h46250e7_0367Linking gmpy2-2.1.5-py311he48d604_0368Linking brotli-python-1.1.0-py311hb755f60_1369Linking tinyarray-1.2.4-py311h320fe9a_3370Linking pillow-10.3.0-py311h18e6fac_0371Linking kiwisolver-1.4.5-py311h9547e67_1372Linking greenlet-3.0.3-py311hb755f60_0373Linking debugpy-1.8.1-py311hb755f60_0374Linking tornado-6.4-py311h459d7ec_0375Linking pyzmq-26.0.2-py311h08a0b41_0376Linking psutil-5.9.8-py311h459d7ec_0377Linking markupsafe-2.1.5-py311h459d7ec_0378Linking pyyaml-6.0.1-py311h459d7ec_1379Linking numpy-1.26.4-py311h64a7726_0380Linking fonttools-4.51.0-py311h459d7ec_0381Linking jupyter_core-5.7.2-py311h38be061_0382Linking sqlalchemy-2.0.29-py311h459d7ec_0383Linking contourpy-1.2.1-py311h9547e67_0384Linking scipy-1.13.0-py311h517d4fd_1385Linking matplotlib-base-3.8.4-py311h54ef318_0386Linking referencing-0.35.1-pyhd8ed1ab_0387Linking sympy-1.12-pypyh9d50eac_103388Linking urllib3-2.2.1-pyhd8ed1ab_0389Linking jinja2-3.1.3-pyhd8ed1ab_0390Linking jupyter_client-8.6.1-pyhd8ed1ab_0391Linking jsonschema-specifications-2023.12.1-pyhd8ed1ab_0392Linking qsymm-1.4.0-pyhd8ed1ab_0393Linking requests-2.31.0-pyhd8ed1ab_0394Linking ipykernel-6.29.3-pyhd33586a_0395Linking jsonschema-4.22.0-pyhd8ed1ab_0396Linking sphinx-7.3.7-pyhd8ed1ab_0397Linking sphinxcontrib-applehelp-1.0.8-pyhd8ed1ab_0398Linking nbformat-5.10.4-pyhd8ed1ab_0399Linking sphinxcontrib-devhelp-1.0.6-pyhd8ed1ab_0400Linking nbclient-0.10.0-pyhd8ed1ab_0401Linking sphinxcontrib-htmlhelp-2.0.5-pyhd8ed1ab_0402Linking jupyter-cache-1.0.0-pyhd8ed1ab_0403Linking sphinxcontrib-qthelp-1.0.7-pyhd8ed1ab_0404Linking sphinxcontrib-serializinghtml-1.1.10-pyhd8ed1ab_0405Linking myst-parser-3.0.1-pyhd8ed1ab_0406Linking sphinx-copybutton-0.5.2-pyhd8ed1ab_0407Linking sphinx-togglebutton-0.3.2-pyhd8ed1ab_0408Linking myst-nb-1.1.0-pyhd8ed1ab_0409Linking kwant-1.4.4-nompi_py311hfed7191_102410Transaction finished411To activate this environment, use:412 micromamba activate pymf-docs413Or to execute a single command in this environment, use:414 micromamba run -n pymf-docs mycommand415Installing pip packages: sphinx-book-theme>=1.1.0, sphinx-tippy, ..416Processing /builds/qt/kwant-scf417 Installing build dependencies: started418 Installing build dependencies: finished with status 'done'419 Getting requirements to build wheel: started420 Getting requirements to build wheel: finished with status 'done'421 Preparing metadata (pyproject.toml): started422 Preparing metadata (pyproject.toml): finished with status 'done'423Collecting sphinx-book-theme>=1.1.0 (from -r /builds/qt/kwant-scf/docs/mambafdl1tFN6phI (line 1))424 Downloading sphinx_book_theme-1.1.2-py3-none-any.whl.metadata (5.7 kB)425Collecting sphinx-tippy (from -r /builds/qt/kwant-scf/docs/mambafdl1tFN6phI (line 2))426 Downloading sphinx_tippy-0.4.3-py3-none-any.whl.metadata (1.2 kB)427Requirement already satisfied: sphinx>=5 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafdl1tFN6phI (line 1)) (7.3.7)428Collecting pydata-sphinx-theme>=0.14 (from sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafdl1tFN6phI (line 1))429 Downloading pydata_sphinx_theme-0.15.2-py3-none-any.whl.metadata (7.3 kB)430Collecting beautifulsoup4 (from sphinx-tippy->-r /builds/qt/kwant-scf/docs/mambafdl1tFN6phI (line 2))431 Downloading beautifulsoup4-4.12.3-py3-none-any.whl.metadata (3.8 kB)432Requirement 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sphinx_tippy-0.4.3-py3-none-any.whl (10.0 kB)462Downloading pydata_sphinx_theme-0.15.2-py3-none-any.whl (4.5 MB)463 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.5/4.5 MB 11.5 MB/s eta 0:00:00464Downloading beautifulsoup4-4.12.3-py3-none-any.whl (147 kB)465 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 147.9/147.9 kB 3.1 MB/s eta 0:00:00466Downloading soupsieve-2.5-py3-none-any.whl (36 kB)467Downloading accessible_pygments-0.0.4-py2.py3-none-any.whl (29 kB)468Building wheels for collected packages: pymf469 Building wheel for pymf (pyproject.toml): started470 Building wheel for pymf (pyproject.toml): finished with status 'done'471 Created wheel for pymf: filename=pymf-0.1.dev53+g9ccbf04-py3-none-any.whl size=17187 sha256=5798ded88e95644caa358900e763f86a0cde68feabbeb72d3dc42899a0f1d005472 Stored in directory: /home/mambauser/.cache/pip/wheels/5b/06/10/8869722029570f6f33627b817da751714f487bfb77cdb04f2f473Successfully built pymf474Installing collected packages: soupsieve, accessible-pygments, pymf, beautifulsoup4, sphinx-tippy, pydata-sphinx-theme, sphinx-book-theme475Successfully installed accessible-pygments-0.0.4 beautifulsoup4-4.12.3 pydata-sphinx-theme-0.15.2 pymf-0.1.dev53+g9ccbf04 soupsieve-2.5 sphinx-book-theme-1.1.2 sphinx-tippy-0.4.3476$ eval "$(micromamba shell hook --shell bash)"477$ micromamba activate pymf-docs478$ pip install pytest-cov pytest-randomly pytest-repeat pytest-ruff pytest-regressions479Collecting pytest-cov480 Downloading pytest_cov-5.0.0-py3-none-any.whl.metadata (27 kB)481Collecting pytest-randomly482 Downloading pytest_randomly-3.15.0-py3-none-any.whl.metadata (8.6 kB)483Collecting pytest-repeat484 Downloading pytest_repeat-0.9.3-py3-none-any.whl.metadata (4.9 kB)485Collecting pytest-ruff486 Downloading pytest_ruff-0.3.2-py3-none-any.whl.metadata (1.6 kB)487Collecting pytest-regressions488 Downloading pytest_regressions-2.5.0-py3-none-any.whl.metadata (4.7 kB)489Requirement already satisfied: pytest>=4.6 in ./micromamba/envs/pymf-docs/lib/python3.11/site-packages (from pytest-cov) (8.2.0)490Collecting coverage>=5.2.1 (from coverage[toml]>=5.2.1->pytest-cov)491 Downloading coverage-7.5.1-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (8.2 kB)492Collecting ruff>=0.0.242 (from pytest-ruff)493 Downloading ruff-0.4.3-py3-none-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (23 kB)494Collecting pytest-datadir>=1.2.0 (from pytest-regressions)495 Downloading pytest_datadir-1.5.0-py3-none-any.whl.metadata (2.6 kB)496Requirement already satisfied: pyyaml in ./micromamba/envs/pymf-docs/lib/python3.11/site-packages (from pytest-regressions) (6.0.1)497Requirement already satisfied: iniconfig in ./micromamba/envs/pymf-docs/lib/python3.11/site-packages (from pytest>=4.6->pytest-cov) (2.0.0)498Requirement already satisfied: packaging in ./micromamba/envs/pymf-docs/lib/python3.11/site-packages (from pytest>=4.6->pytest-cov) (24.0)499Requirement already satisfied: pluggy<2.0,>=1.5 in ./micromamba/envs/pymf-docs/lib/python3.11/site-packages (from pytest>=4.6->pytest-cov) (1.5.0)500Downloading pytest_cov-5.0.0-py3-none-any.whl (21 kB)501Downloading pytest_randomly-3.15.0-py3-none-any.whl (8.7 kB)502Downloading pytest_repeat-0.9.3-py3-none-any.whl (4.2 kB)503Downloading pytest_ruff-0.3.2-py3-none-any.whl (4.6 kB)504Downloading pytest_regressions-2.5.0-py3-none-any.whl (23 kB)505Downloading coverage-7.5.1-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (235 kB)506 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 235.6/235.6 kB 7.1 MB/s eta 0:00:00507Downloading pytest_datadir-1.5.0-py3-none-any.whl (5.1 kB)508Downloading ruff-0.4.3-py3-none-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (8.7 MB)509 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 8.7/8.7 MB 66.5 MB/s eta 0:00:00510Installing collected packages: ruff, coverage, pytest-ruff, pytest-repeat, pytest-randomly, pytest-datadir, pytest-regressions, pytest-cov511Successfully installed coverage-7.5.1 pytest-cov-5.0.0 pytest-datadir-1.5.0 pytest-randomly-3.15.0 pytest-regressions-2.5.0 pytest-repeat-0.9.3 pytest-ruff-0.3.2 ruff-0.4.3512$ py.test513============================= test session starts ==============================514platform linux -- Python 3.11.9, pytest-8.2.0, pluggy-1.5.0 -- /builds/qt/kwant-scf/micromamba/envs/pymf-docs/bin/python3.11515cachedir: .pytest_cache516Using --randomly-seed=724237781517rootdir: /builds/qt/kwant-scf518configfile: pytest.ini519testpaths: pymf520plugins: randomly-3.15.0, repeat-0.9.3, cov-5.0.0, ruff-0.3.2, datadir-1.5.0, regressions-2.5.0521collecting ... collected 82 items522pymf/tests/test_zero_hint.py::test_zero_hint[7] PASSED [ 1%]523pymf/tests/test_zero_hint.py::test_zero_hint[8] PASSED [ 2%]524pymf/tests/test_zero_hint.py::test_zero_hint[5] PASSED [ 3%]525pymf/tests/test_zero_hint.py::test_zero_hint[1] PASSED [ 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69%]579pymf/tests/test_hat.py::ruff PASSED [ 70%]580pymf/tests/test_hubbard.py::ruff PASSED [ 71%]581pymf/tests/test_params.py::ruff PASSED [ 73%]582pymf/tests/test_tb.py::ruff PASSED [ 74%]583pymf/tests/test_zero_hint.py::ruff PASSED [ 75%]584pymf/tests/test_tb.py::test_fourier[1] PASSED [ 76%]585pymf/tests/test_tb.py::test_fourier[5] PASSED [ 78%]586pymf/tests/test_tb.py::test_fourier[9] PASSED [ 79%]587pymf/tests/test_tb.py::test_fourier[8] PASSED [ 80%]588pymf/tests/test_tb.py::test_fourier[7] PASSED [ 81%]589pymf/tests/test_tb.py::test_fourier[4] PASSED [ 82%]590pymf/tests/test_tb.py::test_fourier[2] PASSED [ 84%]591pymf/tests/test_tb.py::test_fourier[6] PASSED [ 85%]592pymf/tests/test_tb.py::test_fourier[3] PASSED [ 86%]593pymf/tests/test_tb.py::test_fourier[0] PASSED [ 87%]594pymf/tests/test_hubbard.py::test_gap_hubbard[9] PASSED [ 89%]595pymf/tests/test_hubbard.py::test_gap_hubbard[1] PASSED [ 90%]596pymf/tests/test_hubbard.py::test_gap_hubbard[0] PASSED [ 91%]597pymf/tests/test_hubbard.py::test_gap_hubbard[8] PASSED [ 92%]598pymf/tests/test_hubbard.py::test_gap_hubbard[5] PASSED [ 93%]599pymf/tests/test_hubbard.py::test_gap_hubbard[4] PASSED [ 95%]600pymf/tests/test_hubbard.py::test_gap_hubbard[3] PASSED [ 96%]601pymf/tests/test_hubbard.py::test_gap_hubbard[7] PASSED [ 97%]602pymf/tests/test_hubbard.py::test_gap_hubbard[6] PASSED [ 98%]603pymf/tests/test_hubbard.py::test_gap_hubbard[2] PASSED [100%]604-------------- generated xml file: /builds/qt/kwant-scf/junit.xml --------------605---------- coverage: platform linux, python 3.11.9-final-0 -----------606Name Stmts Miss Cover607---------------------------------------------------------608pymf/__init__.py 7 7 0%609pymf/_version.py 11 11 0%610pymf/kwant_helper/__init__.py 0 0 100%611pymf/kwant_helper/kwant_examples.py 18 18 0%612pymf/kwant_helper/utils.py 70 70 0%613pymf/mf.py 37 37 0%614pymf/model.py 40 40 0%615pymf/observables.py 3 3 0%616pymf/params/__init__.py 0 0 100%617pymf/params/param_transforms.py 28 28 0%618pymf/params/rparams.py 6 6 0%619pymf/solvers.py 19 19 0%620pymf/tb/__init__.py 0 0 100%621pymf/tb/tb.py 8 8 0%622pymf/tb/transforms.py 34 34 0%623pymf/tb/utils.py 24 24 0%624pymf/tests/test_graphene.py 46 0 100%625pymf/tests/test_hat.py 32 0 100%626pymf/tests/test_hubbard.py 26 0 100%627pymf/tests/test_params.py 15 0 100%628pymf/tests/test_tb.py 20 0 100%629pymf/tests/test_zero_hint.py 24 0 100%630---------------------------------------------------------631TOTAL 468 305 35%632Coverage HTML written to dir htmlcov633Coverage XML written to file coverage.xml634======================== 82 passed in 71.63s (0:01:11) =========================636Uploading artifacts...637htmlcov: found 32 matching files and directories 638Uploading artifacts as "archive" to coordinator... 201 Created id=422122 responseStatus=201 Created token=glcbt-64639Uploading artifacts...640junit.xml: found 1 matching files and directories 641Uploading artifacts as "junit" to coordinator... 201 Created id=422122 responseStatus=201 Created token=glcbt-64642Uploading artifacts...643coverage.xml: found 1 matching files and directories 644Uploading artifacts as "cobertura" to coordinator... 201 Created id=422122 responseStatus=201 Created token=glcbt-64646Job succeeded