run docs
Passed Started
by
@antoniolrm
Antonio Manesco
1Running with gitlab-runner 15.4.0 (43b2dc3d)2 on universal-tn4 d3cf99854Using Docker executor with image mambaorg/micromamba:1.4.3 ...5Authenticating with credentials from /root/.docker/config.json6Pulling docker image mambaorg/micromamba:1.4.3 ...7Using docker image sha256:bcfdda4930c6becbd40d3a8eb6d835e4d2275d16767fdd5000a25507d1c56b02 for mambaorg/micromamba:1.4.3 with digest mambaorg/micromamba@sha256:25b00e28c39abc2e698943c2279fa865d0ec7c97891c7faecafb5c6417313e71 ...9Running on runner-d3cf9985-project-3642-concurrent-2 via tnw-tn4.tudelft.net...11Fetching changes with git depth set to 20...12Reinitialized existing Git repository in /builds/qt/meanfi/.git/13Checking out 903bf515 as builder_fixes...14Removing docs/build/15Removing meanfi/_version.py16Removing micromamba/17Skipping Git submodules setup19Using docker image sha256:bcfdda4930c6becbd40d3a8eb6d835e4d2275d16767fdd5000a25507d1c56b02 for mambaorg/micromamba:1.4.3 with digest mambaorg/micromamba@sha256:25b00e28c39abc2e698943c2279fa865d0ec7c97891c7faecafb5c6417313e71 ...20$ mkdir -p micromamba21$ export MAMBA_ROOT_PREFIX=micromamba22$ micromamba create -yf docs/environment.yml23 __24 __ ______ ___ ____ _____ ___ / /_ ____ _25 / / / / __ `__ \/ __ `/ __ `__ \/ __ \/ __ `/26 / /_/ / / / / / / /_/ / / / / / / /_/ / /_/ /27 / .___/_/ /_/ /_/\__,_/_/ /_/ /_/_.___/\__,_/28 /_/29Transaction30 Prefix: /builds/qt/meanfi/micromamba/envs/meanfi-docs31 Updating specs:32 - python=3.1133 - kwant34 - myst-nb35 - numpy36 - scipy37 - matplotlib-base38 - sphinx-togglebutton39 - sphinx-copybutton40 - pip41 - git42 - make43 Package Version Build Channel Size44─────────────────────────────────────────────────────────────────────────────────────────────────45 Install:46─────────────────────────────────────────────────────────────────────────────────────────────────47 + _libgcc_mutex 0.1 conda_forge conda-forge 3kB48 + _openmp_mutex 4.5 2_gnu conda-forge 24kB49 + alabaster 0.7.16 pyhd8ed1ab_0 conda-forge 18kB50 + asttokens 2.4.1 pyhd8ed1ab_0 conda-forge 29kB51 + attrs 23.2.0 pyh71513ae_0 conda-forge 55kB52 + babel 2.14.0 pyhd8ed1ab_0 conda-forge 8MB53 + brotli 1.1.0 hd590300_1 conda-forge 19kB54 + brotli-bin 1.1.0 hd590300_1 conda-forge 19kB55 + brotli-python 1.1.0 py311hb755f60_1 conda-forge 351kB56 + bzip2 1.0.8 hd590300_5 conda-forge 254kB57 + c-ares 1.28.1 hd590300_0 conda-forge 169kB58 + ca-certificates 2024.2.2 hbcca054_0 conda-forge 155kB59 + certifi 2024.2.2 pyhd8ed1ab_0 conda-forge 161kB60 + charset-normalizer 3.3.2 pyhd8ed1ab_0 conda-forge 47kB61 + click 8.1.7 unix_pyh707e725_0 conda-forge 84kB62 + colorama 0.4.6 pyhd8ed1ab_0 conda-forge 25kB63 + comm 0.2.2 pyhd8ed1ab_0 conda-forge 12kB64 + contourpy 1.2.1 py311h9547e67_0 conda-forge 259kB65 + cycler 0.12.1 pyhd8ed1ab_0 conda-forge 13kB66 + debugpy 1.8.1 py311hb755f60_0 conda-forge 2MB67 + decorator 5.1.1 pyhd8ed1ab_0 conda-forge 12kB68 + docutils 0.21.2 pyhd8ed1ab_0 conda-forge 403kB69 + exceptiongroup 1.2.0 pyhd8ed1ab_2 conda-forge 21kB70 + executing 2.0.1 pyhd8ed1ab_0 conda-forge 28kB71 + fonttools 4.51.0 py311h459d7ec_0 conda-forge 3MB72 + freetype 2.12.1 h267a509_2 conda-forge 635kB73 + git 2.45.1 pl5321hef9f9f3_0 conda-forge 10MB74 + gmp 6.3.0 h59595ed_1 conda-forge 570kB75 + gmpy2 2.1.5 py311hc4f1f91_1 conda-forge 205kB76 + greenlet 3.0.3 py311hb755f60_0 conda-forge 236kB77 + idna 3.7 pyhd8ed1ab_0 conda-forge 53kB78 + imagesize 1.4.1 pyhd8ed1ab_0 conda-forge 10kB79 + importlib-metadata 7.1.0 pyha770c72_0 conda-forge 27kB80 + importlib_metadata 7.1.0 hd8ed1ab_0 conda-forge 9kB81 + importlib_resources 6.4.0 pyhd8ed1ab_0 conda-forge 33kB82 + iniconfig 2.0.0 pyhd8ed1ab_0 conda-forge 11kB83 + ipykernel 6.29.3 pyhd33586a_0 conda-forge 119kB84 + ipython 8.24.0 pyh707e725_0 conda-forge 596kB85 + jedi 0.19.1 pyhd8ed1ab_0 conda-forge 841kB86 + jinja2 3.1.4 pyhd8ed1ab_0 conda-forge 112kB87 + jsonschema 4.22.0 pyhd8ed1ab_0 conda-forge 74kB88 + jsonschema-specifications 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conda-forge 113kB108 + libexpat 2.6.2 h59595ed_0 conda-forge 74kB109 + libffi 3.4.2 h7f98852_5 conda-forge 58kB110 + libgcc-ng 13.2.0 h77fa898_7 conda-forge 776kB111 + libgfortran-ng 13.2.0 h69a702a_7 conda-forge 24kB112 + libgfortran5 13.2.0 hca663fb_7 conda-forge 1MB113 + libgomp 13.2.0 h77fa898_7 conda-forge 422kB114 + libiconv 1.17 hd590300_2 conda-forge 706kB115 + libjpeg-turbo 3.0.0 hd590300_1 conda-forge 619kB116 + liblapack 3.9.0 22_linux64_openblas conda-forge 14kB117 + libnghttp2 1.58.0 h47da74e_1 conda-forge 632kB118 + libnsl 2.0.1 hd590300_0 conda-forge 33kB119 + libopenblas 0.3.27 pthreads_h413a1c8_0 conda-forge 6MB120 + libpng 1.6.43 h2797004_0 conda-forge 288kB121 + libscotch 7.0.4 h91e35bf_1 conda-forge 340kB122 + libsodium 1.0.18 h36c2ea0_1 conda-forge 375kB123 + libsqlite 3.45.3 h2797004_0 conda-forge 860kB124 + libssh2 1.11.0 h0841786_0 conda-forge 271kB125 + libstdcxx-ng 13.2.0 hc0a3c3a_7 conda-forge 4MB126 + libtiff 4.6.0 h1dd3fc0_3 conda-forge 283kB127 + libuuid 2.38.1 h0b41bf4_0 conda-forge 34kB128 + libwebp-base 1.4.0 hd590300_0 conda-forge 439kB129 + libxcb 1.15 h0b41bf4_0 conda-forge 384kB130 + libxcrypt 4.4.36 hd590300_1 conda-forge 100kB131 + libzlib 1.2.13 hd590300_5 conda-forge 62kB132 + make 4.3 hd18ef5c_1 conda-forge 519kB133 + markdown-it-py 3.0.0 pyhd8ed1ab_0 conda-forge 64kB134 + markupsafe 2.1.5 py311h459d7ec_0 conda-forge 28kB135 + matplotlib-base 3.8.4 py311ha4ca890_1 conda-forge 8MB136 + matplotlib-inline 0.1.7 pyhd8ed1ab_0 conda-forge 15kB137 + mdit-py-plugins 0.4.1 pyhd8ed1ab_0 conda-forge 42kB138 + mdurl 0.1.2 pyhd8ed1ab_0 conda-forge 15kB139 + metis 5.1.0 h59595ed_1007 conda-forge 4MB140 + mpc 1.3.1 hfe3b2da_0 conda-forge 116kB141 + mpfr 4.2.1 h9458935_1 conda-forge 643kB142 + mpmath 1.3.0 pyhd8ed1ab_0 conda-forge 438kB143 + mumps-include 5.7.1 ha770c72_0 conda-forge 22kB144 + mumps-seq 5.7.1 h6e8dedb_0 conda-forge 2MB145 + munkres 1.1.4 pyh9f0ad1d_0 conda-forge 12kB146 + myst-nb 1.1.0 pyhd8ed1ab_0 conda-forge 63kB147 + myst-parser 3.0.1 pyhd8ed1ab_0 conda-forge 72kB148 + nbclient 0.10.0 pyhd8ed1ab_0 conda-forge 28kB149 + nbformat 5.10.4 pyhd8ed1ab_0 conda-forge 101kB150 + ncurses 6.5 h59595ed_0 conda-forge 887kB151 + nest-asyncio 1.6.0 pyhd8ed1ab_0 conda-forge 12kB152 + numpy 1.26.4 py311h64a7726_0 conda-forge 8MB153 + openjpeg 2.5.2 h488ebb8_0 conda-forge 342kB154 + openssl 3.3.0 hd590300_0 conda-forge 3MB155 + packaging 24.0 pyhd8ed1ab_0 conda-forge 50kB156 + parso 0.8.4 pyhd8ed1ab_0 conda-forge 75kB157 + pcre2 10.43 hcad00b1_0 conda-forge 951kB158 + perl 5.32.1 7_hd590300_perl5 conda-forge 13MB159 + pexpect 4.9.0 pyhd8ed1ab_0 conda-forge 54kB160 + pickleshare 0.7.5 py_1003 conda-forge 9kB161 + pillow 10.3.0 py311h18e6fac_0 conda-forge 43MB162 + pip 24.0 pyhd8ed1ab_0 conda-forge 1MB163 + pkgutil-resolve-name 1.3.10 pyhd8ed1ab_1 conda-forge 11kB164 + platformdirs 4.2.2 pyhd8ed1ab_0 conda-forge 21kB165 + pluggy 1.5.0 pyhd8ed1ab_0 conda-forge 24kB166 + prompt-toolkit 3.0.42 pyha770c72_0 conda-forge 270kB167 + psutil 5.9.8 py311h459d7ec_0 conda-forge 506kB168 + pthread-stubs 0.4 h36c2ea0_1001 conda-forge 6kB169 + ptyprocess 0.7.0 pyhd3deb0d_0 conda-forge 17kB170 + pure_eval 0.2.2 pyhd8ed1ab_0 conda-forge 15kB171 + pygments 2.18.0 pyhd8ed1ab_0 conda-forge 879kB172 + pyparsing 3.1.2 pyhd8ed1ab_0 conda-forge 89kB173 + pysocks 1.7.1 pyha2e5f31_6 conda-forge 19kB174 + pytest 8.2.0 pyhd8ed1ab_0 conda-forge 257kB175 + python 3.11.9 hb806964_0_cpython conda-forge 31MB176 + python-dateutil 2.9.0 pyhd8ed1ab_0 conda-forge 223kB177 + python-fastjsonschema 2.19.1 pyhd8ed1ab_0 conda-forge 225kB178 + python_abi 3.11 4_cp311 conda-forge 6kB179 + pytz 2024.1 pyhd8ed1ab_0 conda-forge 189kB180 + pyyaml 6.0.1 py311h459d7ec_1 conda-forge 201kB181 + pyzmq 26.0.3 py311h08a0b41_0 conda-forge 475kB182 + qsymm 1.4.0 pyhd8ed1ab_0 conda-forge 71kB183 + readline 8.2 h8228510_1 conda-forge 281kB184 + referencing 0.35.1 pyhd8ed1ab_0 conda-forge 42kB185 + requests 2.31.0 pyhd8ed1ab_0 conda-forge 57kB186 + rpds-py 0.18.1 py311h5ecf98a_0 conda-forge 921kB187 + scipy 1.13.0 py311h517d4fd_1 conda-forge 17MB188 + scotch 7.0.4 h23d43cc_1 conda-forge 92kB189 + setuptools 69.5.1 pyhd8ed1ab_0 conda-forge 502kB190 + six 1.16.0 pyh6c4a22f_0 conda-forge 14kB191 + snowballstemmer 2.2.0 pyhd8ed1ab_0 conda-forge 59kB192 + sphinx 7.3.7 pyhd8ed1ab_0 conda-forge 1MB193 + sphinx-copybutton 0.5.2 pyhd8ed1ab_0 conda-forge 18kB194 + sphinx-togglebutton 0.3.2 pyhd8ed1ab_0 conda-forge 12kB195 + sphinxcontrib-applehelp 1.0.8 pyhd8ed1ab_0 conda-forge 30kB196 + sphinxcontrib-devhelp 1.0.6 pyhd8ed1ab_0 conda-forge 24kB197 + sphinxcontrib-htmlhelp 2.0.5 pyhd8ed1ab_0 conda-forge 33kB198 + sphinxcontrib-jsmath 1.0.1 pyhd8ed1ab_0 conda-forge 10kB199 + sphinxcontrib-qthelp 1.0.7 pyhd8ed1ab_0 conda-forge 27kB200 + sphinxcontrib-serializinghtml 1.1.10 pyhd8ed1ab_0 conda-forge 29kB201 + sqlalchemy 2.0.30 py311h331c9d8_0 conda-forge 4MB202 + stack_data 0.6.2 pyhd8ed1ab_0 conda-forge 26kB203 + sympy 1.12 pypyh9d50eac_103 conda-forge 4MB204 + tabulate 0.9.0 pyhd8ed1ab_1 conda-forge 36kB205 + tinyarray 1.2.4 py311h320fe9a_3 conda-forge 61kB206 + tk 8.6.13 noxft_h4845f30_101 conda-forge 3MB207 + tomli 2.0.1 pyhd8ed1ab_0 conda-forge 16kB208 + tornado 6.4 py311h459d7ec_0 conda-forge 853kB209 + traitlets 5.14.3 pyhd8ed1ab_0 conda-forge 110kB210 + typing-extensions 4.11.0 hd8ed1ab_0 conda-forge 10kB211 + typing_extensions 4.11.0 pyha770c72_0 conda-forge 38kB212 + tzdata 2024a h0c530f3_0 conda-forge 120kB213 + urllib3 2.2.1 pyhd8ed1ab_0 conda-forge 95kB214 + wcwidth 0.2.13 pyhd8ed1ab_0 conda-forge 33kB215 + wheel 0.43.0 pyhd8ed1ab_1 conda-forge 58kB216 + xorg-libxau 1.0.11 hd590300_0 conda-forge 14kB217 + xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge 19kB218 + xz 5.2.6 h166bdaf_0 conda-forge 418kB219 + yaml 0.2.5 h7f98852_2 conda-forge 89kB220 + zeromq 4.3.5 h75354e8_4 conda-forge 353kB221 + zipp 3.17.0 pyhd8ed1ab_0 conda-forge 19kB222 + zlib 1.2.13 hd590300_5 conda-forge 93kB223 + zstd 1.5.6 ha6fb4c9_0 conda-forge 555kB224 Summary:225 Install: 177 packages226 Total download: 208MB227─────────────────────────────────────────────────────────────────────────────────────────────────228Transaction starting229Linking mumps-include-5.7.1-ha770c72_0230Linking _libgcc_mutex-0.1-conda_forge231Linking python_abi-3.11-4_cp311232Linking libstdcxx-ng-13.2.0-hc0a3c3a_7233Linking ca-certificates-2024.2.2-hbcca054_0234Linking ld_impl_linux-64-2.40-h55db66e_0235Linking libgomp-13.2.0-h77fa898_7236Linking _openmp_mutex-4.5-2_gnu237Linking libgcc-ng-13.2.0-h77fa898_7238Linking xorg-libxdmcp-1.1.3-h7f98852_0239Linking pthread-stubs-0.4-h36c2ea0_1001240Linking libsodium-1.0.18-h36c2ea0_1241Linking c-ares-1.28.1-hd590300_0242Linking libev-4.33-hd590300_2243Linking gmp-6.3.0-h59595ed_1244Linking libwebp-base-1.4.0-hd590300_0245Linking libbrotlicommon-1.1.0-hd590300_1246Linking libiconv-1.17-hd590300_2247Linking libdeflate-1.20-hd590300_0248Linking lerc-4.0.0-h27087fc_0249Linking libjpeg-turbo-3.0.0-hd590300_1250Linking xorg-libxau-1.0.11-hd590300_0251Linking metis-5.1.0-h59595ed_1007252Linking libxcrypt-4.4.36-hd590300_1253Linking libzlib-1.2.13-hd590300_5254Linking libffi-3.4.2-h7f98852_5255Linking bzip2-1.0.8-hd590300_5256Linking yaml-0.2.5-h7f98852_2257Linking ncurses-6.5-h59595ed_0258Linking libgfortran5-13.2.0-hca663fb_7259Linking make-4.3-hd18ef5c_1260Linking keyutils-1.6.1-h166bdaf_0261Linking openssl-3.3.0-hd590300_0262Linking libuuid-2.38.1-h0b41bf4_0263Linking libnsl-2.0.1-hd590300_0264Linking libexpat-2.6.2-h59595ed_0265Linking xz-5.2.6-h166bdaf_0266Linking mpfr-4.2.1-h9458935_1267Linking libbrotlienc-1.1.0-hd590300_1268Linking libbrotlidec-1.1.0-hd590300_1269Linking libxcb-1.15-h0b41bf4_0270Linking perl-5.32.1-7_hd590300_perl5271Linking zlib-1.2.13-hd590300_5272Linking zstd-1.5.6-ha6fb4c9_0273Linking libpng-1.6.43-h2797004_0274Linking tk-8.6.13-noxft_h4845f30_101275Linking libsqlite-3.45.3-h2797004_0276Linking pcre2-10.43-hcad00b1_0277Linking libedit-3.1.20191231-he28a2e2_2278Linking readline-8.2-h8228510_1279Linking libgfortran-ng-13.2.0-h69a702a_7280Linking libnghttp2-1.58.0-h47da74e_1281Linking libssh2-1.11.0-h0841786_0282Linking mpc-1.3.1-hfe3b2da_0283Linking brotli-bin-1.1.0-hd590300_1284Linking libtiff-4.6.0-h1dd3fc0_3285Linking freetype-2.12.1-h267a509_2286Linking krb5-1.21.2-h659d440_0287Linking libscotch-7.0.4-h91e35bf_1288Linking libopenblas-0.3.27-pthreads_h413a1c8_0289Linking brotli-1.1.0-hd590300_1290Linking openjpeg-2.5.2-h488ebb8_0291Linking lcms2-2.16-hb7c19ff_0292Linking zeromq-4.3.5-h75354e8_4293Linking libcurl-8.7.1-hca28451_0294Linking scotch-7.0.4-h23d43cc_1295Linking libblas-3.9.0-22_linux64_openblas296Linking git-2.45.1-pl5321hef9f9f3_0297Linking libcblas-3.9.0-22_linux64_openblas298Linking liblapack-3.9.0-22_linux64_openblas299Linking mumps-seq-5.7.1-h6e8dedb_0300Linking tzdata-2024a-h0c530f3_0301Linking python-3.11.9-hb806964_0_cpython302Linking wheel-0.43.0-pyhd8ed1ab_1303Linking setuptools-69.5.1-pyhd8ed1ab_0304Linking pip-24.0-pyhd8ed1ab_0305Linking sphinxcontrib-jsmath-1.0.1-pyhd8ed1ab_0306Linking parso-0.8.4-pyhd8ed1ab_0307Linking pkgutil-resolve-name-1.3.10-pyhd8ed1ab_1308Linking python-fastjsonschema-2.19.1-pyhd8ed1ab_0309Linking ptyprocess-0.7.0-pyhd3deb0d_0310Linking wcwidth-0.2.13-pyhd8ed1ab_0311Linking iniconfig-2.0.0-pyhd8ed1ab_0312Linking six-1.16.0-pyh6c4a22f_0313Linking pure_eval-0.2.2-pyhd8ed1ab_0314Linking executing-2.0.1-pyhd8ed1ab_0315Linking mpmath-1.3.0-pyhd8ed1ab_0316Linking munkres-1.1.4-pyh9f0ad1d_0317Linking platformdirs-4.2.2-pyhd8ed1ab_0318Linking pluggy-1.5.0-pyhd8ed1ab_0319Linking pyparsing-3.1.2-pyhd8ed1ab_0320Linking cycler-0.12.1-pyhd8ed1ab_0321Linking pytz-2024.1-pyhd8ed1ab_0322Linking zipp-3.17.0-pyhd8ed1ab_0323Linking nest-asyncio-1.6.0-pyhd8ed1ab_0324Linking traitlets-5.14.3-pyhd8ed1ab_0325Linking exceptiongroup-1.2.0-pyhd8ed1ab_2326Linking decorator-5.1.1-pyhd8ed1ab_0327Linking tabulate-0.9.0-pyhd8ed1ab_1328Linking click-8.1.7-unix_pyh707e725_0329Linking attrs-23.2.0-pyh71513ae_0330Linking mdurl-0.1.2-pyhd8ed1ab_0331Linking typing_extensions-4.11.0-pyha770c72_0332Linking pickleshare-0.7.5-py_1003333Linking charset-normalizer-3.3.2-pyhd8ed1ab_0334Linking pysocks-1.7.1-pyha2e5f31_6335Linking idna-3.7-pyhd8ed1ab_0336Linking certifi-2024.2.2-pyhd8ed1ab_0337Linking pygments-2.18.0-pyhd8ed1ab_0338Linking alabaster-0.7.16-pyhd8ed1ab_0339Linking tomli-2.0.1-pyhd8ed1ab_0340Linking snowballstemmer-2.2.0-pyhd8ed1ab_0341Linking packaging-24.0-pyhd8ed1ab_0342Linking imagesize-1.4.1-pyhd8ed1ab_0343Linking colorama-0.4.6-pyhd8ed1ab_0344Linking docutils-0.21.2-pyhd8ed1ab_0345Linking jedi-0.19.1-pyhd8ed1ab_0346Linking pexpect-4.9.0-pyhd8ed1ab_0347Linking prompt-toolkit-3.0.42-pyha770c72_0348Linking asttokens-2.4.1-pyhd8ed1ab_0349Linking python-dateutil-2.9.0-pyhd8ed1ab_0350Linking babel-2.14.0-pyhd8ed1ab_0351Linking importlib_resources-6.4.0-pyhd8ed1ab_0352Linking importlib-metadata-7.1.0-pyha770c72_0353Linking comm-0.2.2-pyhd8ed1ab_0354Linking matplotlib-inline-0.1.7-pyhd8ed1ab_0355Linking markdown-it-py-3.0.0-pyhd8ed1ab_0356Linking typing-extensions-4.11.0-hd8ed1ab_0357Linking pytest-8.2.0-pyhd8ed1ab_0358Linking stack_data-0.6.2-pyhd8ed1ab_0359Linking importlib_metadata-7.1.0-hd8ed1ab_0360Linking mdit-py-plugins-0.4.1-pyhd8ed1ab_0361Linking ipython-8.24.0-pyh707e725_0362Linking rpds-py-0.18.1-py311h5ecf98a_0363Linking gmpy2-2.1.5-py311hc4f1f91_1364Linking brotli-python-1.1.0-py311hb755f60_1365Linking tinyarray-1.2.4-py311h320fe9a_3366Linking pillow-10.3.0-py311h18e6fac_0367Linking kiwisolver-1.4.5-py311h9547e67_1368Linking greenlet-3.0.3-py311hb755f60_0369Linking debugpy-1.8.1-py311hb755f60_0370Linking tornado-6.4-py311h459d7ec_0371Linking pyzmq-26.0.3-py311h08a0b41_0372Linking psutil-5.9.8-py311h459d7ec_0373Linking markupsafe-2.1.5-py311h459d7ec_0374Linking pyyaml-6.0.1-py311h459d7ec_1375Linking numpy-1.26.4-py311h64a7726_0376Linking fonttools-4.51.0-py311h459d7ec_0377Linking jupyter_core-5.7.2-py311h38be061_0378Linking sqlalchemy-2.0.30-py311h331c9d8_0379Linking contourpy-1.2.1-py311h9547e67_0380Linking scipy-1.13.0-py311h517d4fd_1381Linking matplotlib-base-3.8.4-py311ha4ca890_1382Linking referencing-0.35.1-pyhd8ed1ab_0383Linking sympy-1.12-pypyh9d50eac_103384Linking urllib3-2.2.1-pyhd8ed1ab_0385Linking jinja2-3.1.4-pyhd8ed1ab_0386Linking jupyter_client-8.6.1-pyhd8ed1ab_0387Linking jsonschema-specifications-2023.12.1-pyhd8ed1ab_0388Linking qsymm-1.4.0-pyhd8ed1ab_0389Linking requests-2.31.0-pyhd8ed1ab_0390Linking ipykernel-6.29.3-pyhd33586a_0391Linking jsonschema-4.22.0-pyhd8ed1ab_0392Linking sphinx-7.3.7-pyhd8ed1ab_0393Linking sphinxcontrib-applehelp-1.0.8-pyhd8ed1ab_0394Linking nbformat-5.10.4-pyhd8ed1ab_0395Linking sphinxcontrib-devhelp-1.0.6-pyhd8ed1ab_0396Linking nbclient-0.10.0-pyhd8ed1ab_0397Linking sphinxcontrib-htmlhelp-2.0.5-pyhd8ed1ab_0398Linking jupyter-cache-1.0.0-pyhd8ed1ab_0399Linking sphinxcontrib-qthelp-1.0.7-pyhd8ed1ab_0400Linking sphinxcontrib-serializinghtml-1.1.10-pyhd8ed1ab_0401Linking myst-parser-3.0.1-pyhd8ed1ab_0402Linking sphinx-copybutton-0.5.2-pyhd8ed1ab_0403Linking sphinx-togglebutton-0.3.2-pyhd8ed1ab_0404Linking myst-nb-1.1.0-pyhd8ed1ab_0405Linking kwant-1.4.4-nompi_py311h4611361_103406Transaction finished407To activate this environment, use:408 micromamba activate meanfi-docs409Or to execute a single command in this environment, use:410 micromamba run -n meanfi-docs mycommand411Installing pip packages: sphinx-book-theme>=1.1.0, sphinx-tippy, ..412Processing /builds/qt/meanfi413 Installing build dependencies: started414 Installing build dependencies: finished with status 'done'415 Getting requirements to build wheel: started416 Getting requirements to build wheel: finished with status 'done'417 Preparing metadata (pyproject.toml): started418 Preparing metadata (pyproject.toml): finished with status 'done'419Collecting sphinx-book-theme>=1.1.0 (from -r /builds/qt/meanfi/docs/mambafLYEUS1ibSB (line 1))420 Downloading sphinx_book_theme-1.1.2-py3-none-any.whl.metadata (5.7 kB)421Collecting sphinx-tippy (from -r /builds/qt/meanfi/docs/mambafLYEUS1ibSB (line 2))422 Downloading sphinx_tippy-0.4.3-py3-none-any.whl.metadata (1.2 kB)423Requirement already satisfied: sphinx>=5 in /builds/qt/meanfi/micromamba/envs/meanfi-docs/lib/python3.11/site-packages (from sphinx-book-theme>=1.1.0->-r /builds/qt/meanfi/docs/mambafLYEUS1ibSB (line 1)) (7.3.7)424Collecting pydata-sphinx-theme>=0.14 (from sphinx-book-theme>=1.1.0->-r /builds/qt/meanfi/docs/mambafLYEUS1ibSB (line 1))425 Downloading pydata_sphinx_theme-0.15.2-py3-none-any.whl.metadata (7.3 kB)426Collecting beautifulsoup4 (from sphinx-tippy->-r /builds/qt/meanfi/docs/mambafLYEUS1ibSB (line 2))427 Downloading beautifulsoup4-4.12.3-py3-none-any.whl.metadata (3.8 kB)428Requirement already satisfied: jinja2 in /builds/qt/meanfi/micromamba/envs/meanfi-docs/lib/python3.11/site-packages (from sphinx-tippy->-r /builds/qt/meanfi/docs/mambafLYEUS1ibSB 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/builds/qt/meanfi/docs/mambafLYEUS1ibSB (line 2)) (2024.2.2)455Collecting soupsieve>1.2 (from beautifulsoup4->sphinx-tippy->-r /builds/qt/meanfi/docs/mambafLYEUS1ibSB (line 2))456 Downloading soupsieve-2.5-py3-none-any.whl.metadata (4.7 kB)457Downloading sphinx_book_theme-1.1.2-py3-none-any.whl (400 kB)458 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 400.8/400.8 kB 14.9 MB/s eta 0:00:00459Downloading sphinx_tippy-0.4.3-py3-none-any.whl (10.0 kB)460Downloading pydata_sphinx_theme-0.15.2-py3-none-any.whl (4.5 MB)461 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.5/4.5 MB 43.5 MB/s eta 0:00:00462Downloading beautifulsoup4-4.12.3-py3-none-any.whl (147 kB)463 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 147.9/147.9 kB 2.8 MB/s eta 0:00:00464Downloading soupsieve-2.5-py3-none-any.whl (36 kB)465Downloading accessible_pygments-0.0.5-py3-none-any.whl (1.4 MB)466 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.4/1.4 MB 34.4 MB/s eta 0:00:00467Building wheels for collected packages: meanfi468 Building wheel for meanfi (pyproject.toml): started469 Building wheel for meanfi (pyproject.toml): finished with status 'done'470 Created wheel for meanfi: filename=meanfi-1.0.1.dev36+g903bf51-py3-none-any.whl size=22229 sha256=c03bb31246a25ba65c15912bd90b2aae4a4c0e08a5ed589a510ba81ab11190eb471 Stored in directory: /tmp/pip-ephem-wheel-cache-oqjiohxu/wheels/36/81/8a/ef14bd396bb5bcd6caf850fef1e7de4f8ebcd4f6b2c52eab62472Successfully built meanfi473Installing collected packages: soupsieve, accessible-pygments, beautifulsoup4, sphinx-tippy, pydata-sphinx-theme, meanfi, sphinx-book-theme474Successfully installed accessible-pygments-0.0.5 beautifulsoup4-4.12.3 meanfi-1.0.1.dev36+g903bf51 pydata-sphinx-theme-0.15.2 soupsieve-2.5 sphinx-book-theme-1.1.2 sphinx-tippy-0.4.3475$ eval "$(micromamba shell hook --shell bash)"476$ micromamba activate meanfi-docs477$ make -C docs/ html SPHINXOPTS="-WT --keep-going -n"478make: Entering directory '/builds/qt/meanfi/docs'479Running Sphinx v7.3.7480making output directory... done481[autosummary] generating autosummary for: AUTHORS.md, documentation/algorithm.md, documentation/meanfi.md, documentation/mf_notes.md, index.md, tutorial/graphene_example.md, tutorial/hubbard_1d.md482loading intersphinx inventory from https://docs.python.org/3/objects.inv...483loading intersphinx inventory from https://kwant-project.org/doc/1/objects.inv...484loading intersphinx inventory from https://numpy.org/doc/stable/objects.inv...485loading intersphinx inventory from https://docs.scipy.org/doc/scipy/objects.inv...486loading intersphinx inventory from https://docs.sympy.org/latest/objects.inv...487myst v3.0.1: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions={'substitution', 'dollarmath', 'amsmath', 'colon_fence'}, disable_syntax=[], all_links_external=False, links_external_new_tab=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=0, heading_slug_func=None, html_meta={}, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True)488myst-nb v1.1.0: NbParserConfig(custom_formats={}, metadata_key='mystnb', cell_metadata_key='mystnb', kernel_rgx_aliases={}, eval_name_regex='^[a-zA-Z_][a-zA-Z0-9_]*$', execution_mode='auto', execution_cache_path='', execution_excludepatterns=(), execution_timeout=120, execution_in_temp=False, execution_allow_errors=False, execution_raise_on_error=True, execution_show_tb=False, merge_streams=False, render_plugin='default', remove_code_source=False, remove_code_outputs=False, code_prompt_show='Show code cell {type}', code_prompt_hide='Hide code cell {type}', number_source_lines=False, output_stderr='show', render_text_lexer='myst-ansi', render_error_lexer='ipythontb', render_image_options={}, render_figure_options={}, render_markdown_format='commonmark', output_folder='build', append_css=True, metadata_to_fm=False)489Using jupyter-cache at: /builds/qt/meanfi/docs/build/.jupyter_cache490The default value for `navigation_with_keys` will change to `False` in the next release. If you wish to preserve the old behavior for your site, set `navigation_with_keys=True` in the `html_theme_options` dict in your `conf.py` file. Be aware that `navigation_with_keys = True` has negative accessibility implications: https://github.com/pydata/pydata-sphinx-theme/issues/1492491building [mo]: targets for 0 po files that are out of date492writing output... 493building [html]: targets for 7 source files that are out of date494updating environment: [new config] 7 added, 0 changed, 0 removed495reading sources... [ 14%] AUTHORS496reading sources... [ 29%] documentation/algorithm497/builds/qt/meanfi/docs/source/documentation/algorithm.md: Skipped execution in 'auto' mode (all outputs present) [mystnb]498reading sources... [ 43%] documentation/meanfi499reading sources... [ 57%] documentation/mf_notes500/builds/qt/meanfi/docs/source/documentation/mf_notes.md: Skipped execution in 'auto' mode (all outputs present) [mystnb]501reading sources... [ 71%] index502/builds/qt/meanfi/docs/source/index.md: Skipped execution in 'auto' mode (all outputs present) [mystnb]503reading sources... [ 86%] tutorial/graphene_example504/builds/qt/meanfi/docs/source/tutorial/graphene_example.md: Executing notebook using local CWD [mystnb]505/builds/qt/meanfi/docs/source/tutorial/graphene_example.md: Executed notebook in 66.81 seconds [mystnb]506reading sources... [100%] tutorial/hubbard_1d507/builds/qt/meanfi/docs/source/tutorial/hubbard_1d.md: Executing notebook using local CWD [mystnb]508/builds/qt/meanfi/docs/source/tutorial/hubbard_1d.md: Executed notebook in 5.26 seconds [mystnb]509looking for now-outdated files... none found510pickling environment... done511checking consistency... done512preparing documents... done513copying assets... copying static files... done514copying extra files... done515done516writing output... [ 14%] AUTHORS517writing output... [ 29%] documentation/algorithm518writing output... [ 43%] documentation/meanfi519writing output... [ 57%] documentation/mf_notes520writing output... [ 71%] index521writing output... [ 86%] tutorial/graphene_example522writing output... [100%] tutorial/hubbard_1d523generating indices... genindex py-modindex done524highlighting module code... [ 11%] meanfi.kwant_helper.utils525highlighting module code... [ 22%] meanfi.mf526highlighting module code... [ 33%] meanfi.model527highlighting module code... [ 44%] meanfi.observables528highlighting module code... [ 56%] meanfi.params.rparams529highlighting module code... [ 67%] meanfi.solvers530highlighting module code... [ 78%] meanfi.tb.tb531highlighting module code... [ 89%] meanfi.tb.transforms532highlighting module code... [100%] meanfi.tb.utils533writing additional pages... search done534copying images... [ 20%] ../build/jupyter_execute/d227ef436b058b3e4819e1dbb93fb4e2729d735afb4dbd9874fc2cfacd9de0bc.png535copying images... [ 40%] ../build/jupyter_execute/68cf782f699d86997a355bad6dcce6ca97a359de38751fc7e7e3bb28ba807fa6.png536copying images... [ 60%] ../build/jupyter_execute/d78681590c7d01ad818cf201ee7a27b1b8c3fee2b96dc19399886c8e87222b4b.png537copying images... [ 80%] ../build/jupyter_execute/6c574c08ed0504708f71d04bded55283708188336f314e78c322404d6290d5c3.png538copying images... [100%] ../build/jupyter_execute/f6f566c38c27cf880d6538a207d332bac6f8de2ba8dbe77010b77f636ebaa65f.png539dumping search index in English (code: en)... done540dumping object inventory... done541Fetching Wikipedia tips[100%] Hubbard_model542Fetching DOI tips543Fetching RTD tips544Writing tippy data files[ 14%] AUTHORS545Writing tippy data files[ 29%] documentation/algorithm546Writing tippy data files[ 43%] documentation/meanfi547Writing tippy data files[ 57%] documentation/mf_notes548Writing tippy data files[ 71%] index549Writing tippy data files[ 86%] tutorial/graphene_example550Writing tippy data files[100%] tutorial/hubbard_1d551build succeeded.552The HTML pages are in build/html.553make: Leaving directory '/builds/qt/meanfi/docs'555Uploading artifacts...556docs/build: found 328 matching files and directories 557Uploading artifacts as "archive" to coordinator... 201 Created id=427701 responseStatus=201 Created token=glcbt-64559Job succeeded