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Passed Started by
Kostas Vilkelis
@Kostas
1Running with gitlab-runner 15.4.0 (43b2dc3d)
2 on universal-tn4 d3cf9985
3 Preparing the "docker" executor 00:06
4Using Docker executor with image mambaorg/micromamba:1.4.3 ...
5Authenticating with credentials from /root/.docker/config.json
6Pulling docker image mambaorg/micromamba:1.4.3 ...
7Using docker image sha256:bcfdda4930c6becbd40d3a8eb6d835e4d2275d16767fdd5000a25507d1c56b02 for mambaorg/micromamba:1.4.3 with digest mambaorg/micromamba@sha256:25b00e28c39abc2e698943c2279fa865d0ec7c97891c7faecafb5c6417313e71 ...
8 Preparing environment 00:02
9Running on runner-d3cf9985-project-3642-concurrent-0 via tnw-tn4.tudelft.net...
10 Getting source from Git repository 00:09
11Fetching changes with git depth set to 20...
12Reinitialized existing Git repository in /builds/qt/kwant-scf/.git/
13Checking out f750ade0 as documentation...
14Removing .coverage
15Removing .pytest_cache/
16Removing .ruff_cache/
17Removing coverage.xml
18Removing htmlcov/
19Removing junit.xml
20Removing micromamba/
21Removing pymf/_version.py
22Removing pymf/tests/__pycache__/
23Skipping Git submodules setup
24 Downloading artifacts 00:03
25Downloading artifacts for run docs (422756)...
26Downloading artifacts from coordinator... ok id=422756 responseStatus=200 OK token=glcbt-64
27Downloading artifacts for run profiler (422755)...
28Downloading artifacts from coordinator... ok id=422755 responseStatus=200 OK token=glcbt-64
29Downloading artifacts for run tests (422754)...
30Downloading artifacts from coordinator... ok id=422754 responseStatus=200 OK token=glcbt-64
31 Executing "step_script" stage of the job script 01:12
32Using docker image sha256:bcfdda4930c6becbd40d3a8eb6d835e4d2275d16767fdd5000a25507d1c56b02 for mambaorg/micromamba:1.4.3 with digest mambaorg/micromamba@sha256:25b00e28c39abc2e698943c2279fa865d0ec7c97891c7faecafb5c6417313e71 ...
33$ mkdir -p micromamba
34$ export MAMBA_ROOT_PREFIX=micromamba
35$ micromamba create -yf docs/environment.yml
36 __
37 __ ______ ___ ____ _____ ___ / /_ ____ _
38 / / / / __ `__ \/ __ `/ __ `__ \/ __ \/ __ `/
39 / /_/ / / / / / / /_/ / / / / / / /_/ / /_/ /
40 / .___/_/ /_/ /_/\__,_/_/ /_/ /_/_.___/\__,_/
41 /_/
42Transaction
43 Prefix: /builds/qt/kwant-scf/micromamba/envs/pymf-docs
44 Updating specs:
45 - python=3.11
46 - kwant
47 - myst-nb
48 - numpy
49 - scipy
50 - matplotlib-base
51 - sphinx-togglebutton
52 - sphinx-copybutton
53 - pip
54 - git
55 - make
56 Package Version Build Channel Size
57─────────────────────────────────────────────────────────────────────────────────────────────────
58 Install:
59─────────────────────────────────────────────────────────────────────────────────────────────────
60 + _libgcc_mutex 0.1 conda_forge conda-forge 3kB
61 + _openmp_mutex 4.5 2_gnu conda-forge 24kB
62 + alabaster 0.7.16 pyhd8ed1ab_0 conda-forge 18kB
63 + asttokens 2.4.1 pyhd8ed1ab_0 conda-forge 29kB
64 + attrs 23.2.0 pyh71513ae_0 conda-forge 55kB
65 + babel 2.14.0 pyhd8ed1ab_0 conda-forge 8MB
66 + brotli 1.1.0 hd590300_1 conda-forge 19kB
67 + brotli-bin 1.1.0 hd590300_1 conda-forge 19kB
68 + brotli-python 1.1.0 py311hb755f60_1 conda-forge 351kB
69 + bzip2 1.0.8 hd590300_5 conda-forge 254kB
70 + c-ares 1.28.1 hd590300_0 conda-forge 169kB
71 + ca-certificates 2024.2.2 hbcca054_0 conda-forge 155kB
72 + certifi 2024.2.2 pyhd8ed1ab_0 conda-forge 161kB
73 + charset-normalizer 3.3.2 pyhd8ed1ab_0 conda-forge 47kB
74 + click 8.1.7 unix_pyh707e725_0 conda-forge 84kB
75 + colorama 0.4.6 pyhd8ed1ab_0 conda-forge 25kB
76 + comm 0.2.2 pyhd8ed1ab_0 conda-forge 12kB
77 + contourpy 1.2.1 py311h9547e67_0 conda-forge 259kB
78 + cycler 0.12.1 pyhd8ed1ab_0 conda-forge 13kB
79 + debugpy 1.8.1 py311hb755f60_0 conda-forge 2MB
80 + decorator 5.1.1 pyhd8ed1ab_0 conda-forge 12kB
81 + docutils 0.21.2 pyhd8ed1ab_0 conda-forge 403kB
82 + exceptiongroup 1.2.0 pyhd8ed1ab_2 conda-forge 21kB
83 + executing 2.0.1 pyhd8ed1ab_0 conda-forge 28kB
84 + fonttools 4.51.0 py311h459d7ec_0 conda-forge 3MB
85 + freetype 2.12.1 h267a509_2 conda-forge 635kB
86 + git 2.45.0 pl5321hef9f9f3_1 conda-forge 11MB
87 + gmp 6.3.0 h59595ed_1 conda-forge 570kB
88 + gmpy2 2.1.5 py311he48d604_0 conda-forge 203kB
89 + greenlet 3.0.3 py311hb755f60_0 conda-forge 236kB
90 + idna 3.7 pyhd8ed1ab_0 conda-forge 53kB
91 + imagesize 1.4.1 pyhd8ed1ab_0 conda-forge 10kB
92 + importlib-metadata 7.1.0 pyha770c72_0 conda-forge 27kB
93 + importlib_metadata 7.1.0 hd8ed1ab_0 conda-forge 9kB
94 + importlib_resources 6.4.0 pyhd8ed1ab_0 conda-forge 33kB
95 + iniconfig 2.0.0 pyhd8ed1ab_0 conda-forge 11kB
96 + ipykernel 6.29.3 pyhd33586a_0 conda-forge 119kB
97 + ipython 8.22.2 pyh707e725_0 conda-forge 594kB
98 + jedi 0.19.1 pyhd8ed1ab_0 conda-forge 841kB
99 + jinja2 3.1.3 pyhd8ed1ab_0 conda-forge 112kB
100 + jsonschema 4.22.0 pyhd8ed1ab_0 conda-forge 74kB
101 + jsonschema-specifications 2023.12.1 pyhd8ed1ab_0 conda-forge 16kB
102 + jupyter-cache 1.0.0 pyhd8ed1ab_0 conda-forge 31kB
103 + jupyter_client 8.6.1 pyhd8ed1ab_0 conda-forge 106kB
104 + jupyter_core 5.7.2 py311h38be061_0 conda-forge 95kB
105 + keyutils 1.6.1 h166bdaf_0 conda-forge 118kB
106 + kiwisolver 1.4.5 py311h9547e67_1 conda-forge 73kB
107 + krb5 1.21.2 h659d440_0 conda-forge 1MB
108 + kwant 1.4.4 nompi_py311hfed7191_102 conda-forge 1MB
109 + lcms2 2.16 hb7c19ff_0 conda-forge 245kB
110 + ld_impl_linux-64 2.40 h55db66e_0 conda-forge 713kB
111 + lerc 4.0.0 h27087fc_0 conda-forge 282kB
112 + libblas 3.9.0 22_linux64_openblas conda-forge 15kB
113 + libbrotlicommon 1.1.0 hd590300_1 conda-forge 69kB
114 + libbrotlidec 1.1.0 hd590300_1 conda-forge 33kB
115 + libbrotlienc 1.1.0 hd590300_1 conda-forge 283kB
116 + libcblas 3.9.0 22_linux64_openblas conda-forge 14kB
117 + libcurl 8.7.1 hca28451_0 conda-forge 398kB
118 + libdeflate 1.20 hd590300_0 conda-forge 72kB
119 + libedit 3.1.20191231 he28a2e2_2 conda-forge 124kB
120 + libev 4.33 hd590300_2 conda-forge 113kB
121 + libexpat 2.6.2 h59595ed_0 conda-forge 74kB
122 + libffi 3.4.2 h7f98852_5 conda-forge 58kB
123 + libgcc-ng 13.2.0 h77fa898_6 conda-forge 778kB
124 + libgfortran-ng 13.2.0 h69a702a_6 conda-forge 24kB
125 + libgfortran5 13.2.0 h43f5ff8_6 conda-forge 1MB
126 + libgomp 13.2.0 h77fa898_6 conda-forge 420kB
127 + libiconv 1.17 hd590300_2 conda-forge 706kB
128 + libjpeg-turbo 3.0.0 hd590300_1 conda-forge 619kB
129 + liblapack 3.9.0 22_linux64_openblas conda-forge 14kB
130 + libnghttp2 1.58.0 h47da74e_1 conda-forge 632kB
131 + libnsl 2.0.1 hd590300_0 conda-forge 33kB
132 + libopenblas 0.3.27 pthreads_h413a1c8_0 conda-forge 6MB
133 + libpng 1.6.43 h2797004_0 conda-forge 288kB
134 + libscotch 7.0.4 h91e35bf_1 conda-forge 340kB
135 + libsodium 1.0.18 h36c2ea0_1 conda-forge 375kB
136 + libsqlite 3.45.3 h2797004_0 conda-forge 860kB
137 + libssh2 1.11.0 h0841786_0 conda-forge 271kB
138 + libstdcxx-ng 13.2.0 hc0a3c3a_6 conda-forge 4MB
139 + libtiff 4.6.0 h1dd3fc0_3 conda-forge 283kB
140 + libuuid 2.38.1 h0b41bf4_0 conda-forge 34kB
141 + libwebp-base 1.4.0 hd590300_0 conda-forge 439kB
142 + libxcb 1.15 h0b41bf4_0 conda-forge 384kB
143 + libxcrypt 4.4.36 hd590300_1 conda-forge 100kB
144 + libzlib 1.2.13 hd590300_5 conda-forge 62kB
145 + make 4.3 hd18ef5c_1 conda-forge 519kB
146 + markdown-it-py 3.0.0 pyhd8ed1ab_0 conda-forge 64kB
147 + markupsafe 2.1.5 py311h459d7ec_0 conda-forge 28kB
148 + matplotlib-base 3.8.4 py311h54ef318_0 conda-forge 8MB
149 + matplotlib-inline 0.1.7 pyhd8ed1ab_0 conda-forge 15kB
150 + mdit-py-plugins 0.4.0 pyhd8ed1ab_0 conda-forge 41kB
151 + mdurl 0.1.2 pyhd8ed1ab_0 conda-forge 15kB
152 + metis 5.1.0 h59595ed_1007 conda-forge 4MB
153 + mpc 1.3.1 hfe3b2da_0 conda-forge 116kB
154 + mpfr 4.2.1 h9458935_1 conda-forge 643kB
155 + mpmath 1.3.0 pyhd8ed1ab_0 conda-forge 438kB
156 + mumps-include 5.6.2 ha770c72_4 conda-forge 27kB
157 + mumps-seq 5.6.2 hfef103a_4 conda-forge 2MB
158 + munkres 1.1.4 pyh9f0ad1d_0 conda-forge 12kB
159 + myst-nb 1.1.0 pyhd8ed1ab_0 conda-forge 63kB
160 + myst-parser 3.0.1 pyhd8ed1ab_0 conda-forge 72kB
161 + nbclient 0.10.0 pyhd8ed1ab_0 conda-forge 28kB
162 + nbformat 5.10.4 pyhd8ed1ab_0 conda-forge 101kB
163 + ncurses 6.4.20240210 h59595ed_0 conda-forge 896kB
164 + nest-asyncio 1.6.0 pyhd8ed1ab_0 conda-forge 12kB
165 + numpy 1.26.4 py311h64a7726_0 conda-forge 8MB
166 + openjpeg 2.5.2 h488ebb8_0 conda-forge 342kB
167 + openssl 3.3.0 hd590300_0 conda-forge 3MB
168 + packaging 24.0 pyhd8ed1ab_0 conda-forge 50kB
169 + parso 0.8.4 pyhd8ed1ab_0 conda-forge 75kB
170 + pcre2 10.43 hcad00b1_0 conda-forge 951kB
171 + perl 5.32.1 7_hd590300_perl5 conda-forge 13MB
172 + pexpect 4.9.0 pyhd8ed1ab_0 conda-forge 54kB
173 + pickleshare 0.7.5 py_1003 conda-forge 9kB
174 + pillow 10.3.0 py311h18e6fac_0 conda-forge 43MB
175 + pip 24.0 pyhd8ed1ab_0 conda-forge 1MB
176 + pkgutil-resolve-name 1.3.10 pyhd8ed1ab_1 conda-forge 11kB
177 + platformdirs 4.2.1 pyhd8ed1ab_0 conda-forge 20kB
178 + pluggy 1.5.0 pyhd8ed1ab_0 conda-forge 24kB
179 + prompt-toolkit 3.0.42 pyha770c72_0 conda-forge 270kB
180 + psutil 5.9.8 py311h459d7ec_0 conda-forge 506kB
181 + pthread-stubs 0.4 h36c2ea0_1001 conda-forge 6kB
182 + ptyprocess 0.7.0 pyhd3deb0d_0 conda-forge 17kB
183 + pure_eval 0.2.2 pyhd8ed1ab_0 conda-forge 15kB
184 + pygments 2.18.0 pyhd8ed1ab_0 conda-forge 879kB
185 + pyparsing 3.1.2 pyhd8ed1ab_0 conda-forge 89kB
186 + pysocks 1.7.1 pyha2e5f31_6 conda-forge 19kB
187 + pytest 8.2.0 pyhd8ed1ab_0 conda-forge 257kB
188 + python 3.11.9 hb806964_0_cpython conda-forge 31MB
189 + python-dateutil 2.9.0 pyhd8ed1ab_0 conda-forge 223kB
190 + python-fastjsonschema 2.19.1 pyhd8ed1ab_0 conda-forge 225kB
191 + python_abi 3.11 4_cp311 conda-forge 6kB
192 + pytz 2024.1 pyhd8ed1ab_0 conda-forge 189kB
193 + pyyaml 6.0.1 py311h459d7ec_1 conda-forge 201kB
194 + pyzmq 26.0.2 py311h08a0b41_0 conda-forge 474kB
195 + qsymm 1.4.0 pyhd8ed1ab_0 conda-forge 71kB
196 + readline 8.2 h8228510_1 conda-forge 281kB
197 + referencing 0.35.1 pyhd8ed1ab_0 conda-forge 42kB
198 + requests 2.31.0 pyhd8ed1ab_0 conda-forge 57kB
199 + rpds-py 0.18.0 py311h46250e7_0 conda-forge 916kB
200 + scipy 1.13.0 py311h517d4fd_1 conda-forge 17MB
201 + scotch 7.0.4 h23d43cc_1 conda-forge 92kB
202 + setuptools 69.5.1 pyhd8ed1ab_0 conda-forge 502kB
203 + six 1.16.0 pyh6c4a22f_0 conda-forge 14kB
204 + snowballstemmer 2.2.0 pyhd8ed1ab_0 conda-forge 59kB
205 + sphinx 7.3.7 pyhd8ed1ab_0 conda-forge 1MB
206 + sphinx-copybutton 0.5.2 pyhd8ed1ab_0 conda-forge 18kB
207 + sphinx-togglebutton 0.3.2 pyhd8ed1ab_0 conda-forge 12kB
208 + sphinxcontrib-applehelp 1.0.8 pyhd8ed1ab_0 conda-forge 30kB
209 + sphinxcontrib-devhelp 1.0.6 pyhd8ed1ab_0 conda-forge 24kB
210 + sphinxcontrib-htmlhelp 2.0.5 pyhd8ed1ab_0 conda-forge 33kB
211 + sphinxcontrib-jsmath 1.0.1 pyhd8ed1ab_0 conda-forge 10kB
212 + sphinxcontrib-qthelp 1.0.7 pyhd8ed1ab_0 conda-forge 27kB
213 + sphinxcontrib-serializinghtml 1.1.10 pyhd8ed1ab_0 conda-forge 29kB
214 + sqlalchemy 2.0.30 py311h331c9d8_0 conda-forge 4MB
215 + stack_data 0.6.2 pyhd8ed1ab_0 conda-forge 26kB
216 + sympy 1.12 pypyh9d50eac_103 conda-forge 4MB
217 + tabulate 0.9.0 pyhd8ed1ab_1 conda-forge 36kB
218 + tinyarray 1.2.4 py311h320fe9a_3 conda-forge 61kB
219 + tk 8.6.13 noxft_h4845f30_101 conda-forge 3MB
220 + tomli 2.0.1 pyhd8ed1ab_0 conda-forge 16kB
221 + tornado 6.4 py311h459d7ec_0 conda-forge 853kB
222 + traitlets 5.14.3 pyhd8ed1ab_0 conda-forge 110kB
223 + typing-extensions 4.11.0 hd8ed1ab_0 conda-forge 10kB
224 + typing_extensions 4.11.0 pyha770c72_0 conda-forge 38kB
225 + tzdata 2024a h0c530f3_0 conda-forge 120kB
226 + urllib3 2.2.1 pyhd8ed1ab_0 conda-forge 95kB
227 + wcwidth 0.2.13 pyhd8ed1ab_0 conda-forge 33kB
228 + wheel 0.43.0 pyhd8ed1ab_1 conda-forge 58kB
229 + xorg-libxau 1.0.11 hd590300_0 conda-forge 14kB
230 + xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge 19kB
231 + xz 5.2.6 h166bdaf_0 conda-forge 418kB
232 + yaml 0.2.5 h7f98852_2 conda-forge 89kB
233 + zeromq 4.3.5 h75354e8_3 conda-forge 352kB
234 + zipp 3.17.0 pyhd8ed1ab_0 conda-forge 19kB
235 + zlib 1.2.13 hd590300_5 conda-forge 93kB
236 + zstd 1.5.6 ha6fb4c9_0 conda-forge 555kB
237 Summary:
238 Install: 177 packages
239 Total download: 208MB
240─────────────────────────────────────────────────────────────────────────────────────────────────
241Transaction starting
242Linking python_abi-3.11-4_cp311
243Linking ca-certificates-2024.2.2-hbcca054_0
244Linking mumps-include-5.6.2-ha770c72_4
245Linking _libgcc_mutex-0.1-conda_forge
246Linking libstdcxx-ng-13.2.0-hc0a3c3a_6
247Linking ld_impl_linux-64-2.40-h55db66e_0
248Linking libgomp-13.2.0-h77fa898_6
249Linking _openmp_mutex-4.5-2_gnu
250Linking libgcc-ng-13.2.0-h77fa898_6
251Linking xorg-libxdmcp-1.1.3-h7f98852_0
252Linking pthread-stubs-0.4-h36c2ea0_1001
253Linking libsodium-1.0.18-h36c2ea0_1
254Linking c-ares-1.28.1-hd590300_0
255Linking libev-4.33-hd590300_2
256Linking gmp-6.3.0-h59595ed_1
257Linking metis-5.1.0-h59595ed_1007
258Linking libwebp-base-1.4.0-hd590300_0
259Linking libbrotlicommon-1.1.0-hd590300_1
260Linking libiconv-1.17-hd590300_2
261Linking libdeflate-1.20-hd590300_0
262Linking lerc-4.0.0-h27087fc_0
263Linking libjpeg-turbo-3.0.0-hd590300_1
264Linking xorg-libxau-1.0.11-hd590300_0
265Linking libxcrypt-4.4.36-hd590300_1
266Linking libzlib-1.2.13-hd590300_5
267Linking libffi-3.4.2-h7f98852_5
268Linking bzip2-1.0.8-hd590300_5
269Linking yaml-0.2.5-h7f98852_2
270Linking libgfortran5-13.2.0-h43f5ff8_6
271Linking make-4.3-hd18ef5c_1
272Linking keyutils-1.6.1-h166bdaf_0
273Linking openssl-3.3.0-hd590300_0
274Linking ncurses-6.4.20240210-h59595ed_0
275Linking libuuid-2.38.1-h0b41bf4_0
276Linking libnsl-2.0.1-hd590300_0
277Linking libexpat-2.6.2-h59595ed_0
278Linking xz-5.2.6-h166bdaf_0
279Linking mpfr-4.2.1-h9458935_1
280Linking libbrotlienc-1.1.0-hd590300_1
281Linking libbrotlidec-1.1.0-hd590300_1
282Linking libxcb-1.15-h0b41bf4_0
283Linking perl-5.32.1-7_hd590300_perl5
284Linking zlib-1.2.13-hd590300_5
285Linking zstd-1.5.6-ha6fb4c9_0
286Linking libpng-1.6.43-h2797004_0
287Linking tk-8.6.13-noxft_h4845f30_101
288Linking libsqlite-3.45.3-h2797004_0
289Linking pcre2-10.43-hcad00b1_0
290Linking libgfortran-ng-13.2.0-h69a702a_6
291Linking libnghttp2-1.58.0-h47da74e_1
292Linking libssh2-1.11.0-h0841786_0
293Linking libedit-3.1.20191231-he28a2e2_2
294Linking readline-8.2-h8228510_1
295Linking mpc-1.3.1-hfe3b2da_0
296Linking brotli-bin-1.1.0-hd590300_1
297Linking libtiff-4.6.0-h1dd3fc0_3
298Linking freetype-2.12.1-h267a509_2
299Linking libscotch-7.0.4-h91e35bf_1
300Linking libopenblas-0.3.27-pthreads_h413a1c8_0
301Linking krb5-1.21.2-h659d440_0
302Linking brotli-1.1.0-hd590300_1
303Linking openjpeg-2.5.2-h488ebb8_0
304Linking lcms2-2.16-hb7c19ff_0
305Linking scotch-7.0.4-h23d43cc_1
306Linking libblas-3.9.0-22_linux64_openblas
307Linking zeromq-4.3.5-h75354e8_3
308Linking libcurl-8.7.1-hca28451_0
309Linking libcblas-3.9.0-22_linux64_openblas
310Linking liblapack-3.9.0-22_linux64_openblas
311Linking git-2.45.0-pl5321hef9f9f3_1
312Linking mumps-seq-5.6.2-hfef103a_4
313Linking tzdata-2024a-h0c530f3_0
314Linking python-3.11.9-hb806964_0_cpython
315Linking wheel-0.43.0-pyhd8ed1ab_1
316Linking setuptools-69.5.1-pyhd8ed1ab_0
317Linking pip-24.0-pyhd8ed1ab_0
318Linking sphinxcontrib-jsmath-1.0.1-pyhd8ed1ab_0
319Linking parso-0.8.4-pyhd8ed1ab_0
320Linking pkgutil-resolve-name-1.3.10-pyhd8ed1ab_1
321Linking python-fastjsonschema-2.19.1-pyhd8ed1ab_0
322Linking ptyprocess-0.7.0-pyhd3deb0d_0
323Linking wcwidth-0.2.13-pyhd8ed1ab_0
324Linking iniconfig-2.0.0-pyhd8ed1ab_0
325Linking six-1.16.0-pyh6c4a22f_0
326Linking pure_eval-0.2.2-pyhd8ed1ab_0
327Linking executing-2.0.1-pyhd8ed1ab_0
328Linking mpmath-1.3.0-pyhd8ed1ab_0
329Linking munkres-1.1.4-pyh9f0ad1d_0
330Linking platformdirs-4.2.1-pyhd8ed1ab_0
331Linking pluggy-1.5.0-pyhd8ed1ab_0
332Linking pyparsing-3.1.2-pyhd8ed1ab_0
333Linking cycler-0.12.1-pyhd8ed1ab_0
334Linking pytz-2024.1-pyhd8ed1ab_0
335Linking zipp-3.17.0-pyhd8ed1ab_0
336Linking nest-asyncio-1.6.0-pyhd8ed1ab_0
337Linking traitlets-5.14.3-pyhd8ed1ab_0
338Linking exceptiongroup-1.2.0-pyhd8ed1ab_2
339Linking decorator-5.1.1-pyhd8ed1ab_0
340Linking tabulate-0.9.0-pyhd8ed1ab_1
341Linking click-8.1.7-unix_pyh707e725_0
342Linking attrs-23.2.0-pyh71513ae_0
343Linking mdurl-0.1.2-pyhd8ed1ab_0
344Linking typing_extensions-4.11.0-pyha770c72_0
345Linking pickleshare-0.7.5-py_1003
346Linking charset-normalizer-3.3.2-pyhd8ed1ab_0
347Linking pysocks-1.7.1-pyha2e5f31_6
348Linking idna-3.7-pyhd8ed1ab_0
349Linking certifi-2024.2.2-pyhd8ed1ab_0
350Linking pygments-2.18.0-pyhd8ed1ab_0
351Linking alabaster-0.7.16-pyhd8ed1ab_0
352Linking tomli-2.0.1-pyhd8ed1ab_0
353Linking snowballstemmer-2.2.0-pyhd8ed1ab_0
354Linking packaging-24.0-pyhd8ed1ab_0
355Linking imagesize-1.4.1-pyhd8ed1ab_0
356Linking colorama-0.4.6-pyhd8ed1ab_0
357Linking docutils-0.21.2-pyhd8ed1ab_0
358Linking jedi-0.19.1-pyhd8ed1ab_0
359Linking pexpect-4.9.0-pyhd8ed1ab_0
360Linking prompt-toolkit-3.0.42-pyha770c72_0
361Linking asttokens-2.4.1-pyhd8ed1ab_0
362Linking python-dateutil-2.9.0-pyhd8ed1ab_0
363Linking babel-2.14.0-pyhd8ed1ab_0
364Linking importlib_resources-6.4.0-pyhd8ed1ab_0
365Linking importlib-metadata-7.1.0-pyha770c72_0
366Linking comm-0.2.2-pyhd8ed1ab_0
367Linking matplotlib-inline-0.1.7-pyhd8ed1ab_0
368Linking markdown-it-py-3.0.0-pyhd8ed1ab_0
369Linking typing-extensions-4.11.0-hd8ed1ab_0
370Linking pytest-8.2.0-pyhd8ed1ab_0
371Linking stack_data-0.6.2-pyhd8ed1ab_0
372Linking importlib_metadata-7.1.0-hd8ed1ab_0
373Linking mdit-py-plugins-0.4.0-pyhd8ed1ab_0
374Linking ipython-8.22.2-pyh707e725_0
375Linking rpds-py-0.18.0-py311h46250e7_0
376Linking gmpy2-2.1.5-py311he48d604_0
377Linking brotli-python-1.1.0-py311hb755f60_1
378Linking tinyarray-1.2.4-py311h320fe9a_3
379Linking pillow-10.3.0-py311h18e6fac_0
380Linking kiwisolver-1.4.5-py311h9547e67_1
381Linking greenlet-3.0.3-py311hb755f60_0
382Linking debugpy-1.8.1-py311hb755f60_0
383Linking tornado-6.4-py311h459d7ec_0
384Linking pyzmq-26.0.2-py311h08a0b41_0
385Linking psutil-5.9.8-py311h459d7ec_0
386Linking markupsafe-2.1.5-py311h459d7ec_0
387Linking pyyaml-6.0.1-py311h459d7ec_1
388Linking numpy-1.26.4-py311h64a7726_0
389Linking fonttools-4.51.0-py311h459d7ec_0
390Linking jupyter_core-5.7.2-py311h38be061_0
391Linking sqlalchemy-2.0.30-py311h331c9d8_0
392Linking contourpy-1.2.1-py311h9547e67_0
393Linking scipy-1.13.0-py311h517d4fd_1
394Linking matplotlib-base-3.8.4-py311h54ef318_0
395Linking referencing-0.35.1-pyhd8ed1ab_0
396Linking sympy-1.12-pypyh9d50eac_103
397Linking urllib3-2.2.1-pyhd8ed1ab_0
398Linking jinja2-3.1.3-pyhd8ed1ab_0
399Linking jupyter_client-8.6.1-pyhd8ed1ab_0
400Linking jsonschema-specifications-2023.12.1-pyhd8ed1ab_0
401Linking qsymm-1.4.0-pyhd8ed1ab_0
402Linking requests-2.31.0-pyhd8ed1ab_0
403Linking ipykernel-6.29.3-pyhd33586a_0
404Linking jsonschema-4.22.0-pyhd8ed1ab_0
405Linking sphinx-7.3.7-pyhd8ed1ab_0
406Linking sphinxcontrib-applehelp-1.0.8-pyhd8ed1ab_0
407Linking nbformat-5.10.4-pyhd8ed1ab_0
408Linking sphinxcontrib-devhelp-1.0.6-pyhd8ed1ab_0
409Linking nbclient-0.10.0-pyhd8ed1ab_0
410Linking sphinxcontrib-htmlhelp-2.0.5-pyhd8ed1ab_0
411Linking jupyter-cache-1.0.0-pyhd8ed1ab_0
412Linking sphinxcontrib-qthelp-1.0.7-pyhd8ed1ab_0
413Linking sphinxcontrib-serializinghtml-1.1.10-pyhd8ed1ab_0
414Linking myst-parser-3.0.1-pyhd8ed1ab_0
415Linking sphinx-copybutton-0.5.2-pyhd8ed1ab_0
416Linking sphinx-togglebutton-0.3.2-pyhd8ed1ab_0
417Linking myst-nb-1.1.0-pyhd8ed1ab_0
418Linking kwant-1.4.4-nompi_py311hfed7191_102
419Transaction finished
420To activate this environment, use:
421 micromamba activate pymf-docs
422Or to execute a single command in this environment, use:
423 micromamba run -n pymf-docs mycommand
424Installing pip packages: sphinx-book-theme>=1.1.0, sphinx-tippy, ..
425Processing /builds/qt/kwant-scf
426 Installing build dependencies: started
427 Installing build dependencies: finished with status 'done'
428 Getting requirements to build wheel: started
429 Getting requirements to build wheel: finished with status 'done'
430 Preparing metadata (pyproject.toml): started
431 Preparing metadata (pyproject.toml): finished with status 'done'
432Collecting sphinx-book-theme>=1.1.0 (from -r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 1))
433 Downloading sphinx_book_theme-1.1.2-py3-none-any.whl.metadata (5.7 kB)
434Collecting sphinx-tippy (from -r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 2))
435 Downloading sphinx_tippy-0.4.3-py3-none-any.whl.metadata (1.2 kB)
436Requirement already satisfied: sphinx>=5 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 1)) (7.3.7)
437Collecting pydata-sphinx-theme>=0.14 (from sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 1))
438 Downloading pydata_sphinx_theme-0.15.2-py3-none-any.whl.metadata (7.3 kB)
439Collecting beautifulsoup4 (from sphinx-tippy->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 2))
440 Downloading beautifulsoup4-4.12.3-py3-none-any.whl.metadata (3.8 kB)
441Requirement already satisfied: jinja2 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from sphinx-tippy->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 2)) (3.1.3)
442Requirement already satisfied: requests in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from sphinx-tippy->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 2)) (2.31.0)
443Requirement already satisfied: numpy>=1.23 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from pymf==0.1.dev59+gf750ade->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 3)) (1.26.4)
444Requirement already satisfied: packaging>=22.0 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from pymf==0.1.dev59+gf750ade->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 3)) (24.0)
445Requirement already satisfied: scipy>=1.8 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from pymf==0.1.dev59+gf750ade->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 3)) (1.13.0)
446Requirement already satisfied: docutils!=0.17.0 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from pydata-sphinx-theme>=0.14->sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 1)) (0.21.2)
447Requirement already satisfied: Babel in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from pydata-sphinx-theme>=0.14->sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 1)) (2.14.0)
448Requirement already satisfied: pygments>=2.7 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from pydata-sphinx-theme>=0.14->sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 1)) (2.18.0)
449Collecting accessible-pygments (from pydata-sphinx-theme>=0.14->sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 1))
450 Downloading accessible_pygments-0.0.4-py2.py3-none-any.whl.metadata (6.0 kB)
451Requirement already satisfied: typing-extensions in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from pydata-sphinx-theme>=0.14->sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 1)) (4.11.0)
452Requirement already satisfied: sphinxcontrib-applehelp in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from sphinx>=5->sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 1)) (1.0.8)
453Requirement already satisfied: sphinxcontrib-devhelp in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from sphinx>=5->sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 1)) (1.0.6)
454Requirement already satisfied: sphinxcontrib-jsmath in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from sphinx>=5->sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 1)) (1.0.1)
455Requirement already satisfied: sphinxcontrib-htmlhelp>=2.0.0 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from sphinx>=5->sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 1)) (2.0.5)
456Requirement already satisfied: sphinxcontrib-serializinghtml>=1.1.9 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from sphinx>=5->sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 1)) (1.1.10)
457Requirement already satisfied: sphinxcontrib-qthelp in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from sphinx>=5->sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 1)) (1.0.7)
458Requirement already satisfied: snowballstemmer>=2.0 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from sphinx>=5->sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 1)) (2.2.0)
459Requirement already satisfied: alabaster~=0.7.14 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from sphinx>=5->sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 1)) (0.7.16)
460Requirement already satisfied: imagesize>=1.3 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from sphinx>=5->sphinx-book-theme>=1.1.0->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 1)) (1.4.1)
461Requirement already satisfied: MarkupSafe>=2.0 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from jinja2->sphinx-tippy->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 2)) (2.1.5)
462Requirement already satisfied: charset-normalizer<4,>=2 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from requests->sphinx-tippy->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 2)) (3.3.2)
463Requirement already satisfied: idna<4,>=2.5 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from requests->sphinx-tippy->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 2)) (3.7)
464Requirement already satisfied: urllib3<3,>=1.21.1 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from requests->sphinx-tippy->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 2)) (2.2.1)
465Requirement already satisfied: certifi>=2017.4.17 in /builds/qt/kwant-scf/micromamba/envs/pymf-docs/lib/python3.11/site-packages (from requests->sphinx-tippy->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 2)) (2024.2.2)
466Collecting soupsieve>1.2 (from beautifulsoup4->sphinx-tippy->-r /builds/qt/kwant-scf/docs/mambafG4j39YwNvA (line 2))
467 Downloading soupsieve-2.5-py3-none-any.whl.metadata (4.7 kB)
468Downloading sphinx_book_theme-1.1.2-py3-none-any.whl (400 kB)
469 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 400.8/400.8 kB 13.2 MB/s eta 0:00:00
470Downloading sphinx_tippy-0.4.3-py3-none-any.whl (10.0 kB)
471Downloading pydata_sphinx_theme-0.15.2-py3-none-any.whl (4.5 MB)
472 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 4.5/4.5 MB 13.4 MB/s eta 0:00:00
473Downloading beautifulsoup4-4.12.3-py3-none-any.whl (147 kB)
474 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 147.9/147.9 kB 5.8 MB/s eta 0:00:00
475Downloading soupsieve-2.5-py3-none-any.whl (36 kB)
476Downloading accessible_pygments-0.0.4-py2.py3-none-any.whl (29 kB)
477Building wheels for collected packages: pymf
478 Building wheel for pymf (pyproject.toml): started
479 Building wheel for pymf (pyproject.toml): finished with status 'done'
480 Created wheel for pymf: filename=pymf-0.1.dev59+gf750ade-py3-none-any.whl size=17188 sha256=4d15b17bb1b5943b57c20bd4b1d53bbe25704d147e282bba28d96313ec8da907
481 Stored in directory: /home/mambauser/.cache/pip/wheels/5b/06/10/8869722029570f6f33627b817da751714f487bfb77cdb04f2f
482Successfully built pymf
483Installing collected packages: soupsieve, accessible-pygments, pymf, beautifulsoup4, sphinx-tippy, pydata-sphinx-theme, sphinx-book-theme
484Successfully installed accessible-pygments-0.0.4 beautifulsoup4-4.12.3 pydata-sphinx-theme-0.15.2 pymf-0.1.dev59+gf750ade soupsieve-2.5 sphinx-book-theme-1.1.2 sphinx-tippy-0.4.3
485$ eval "$(micromamba shell hook --shell bash)"
486$ micromamba activate pymf-docs
487$ mkdir public
488$ cp -r htmlcov public/
489$ cp -r docs/build public/
490$ cp -r timeProfile.html public/
491 Uploading artifacts for successful job 00:04
492Uploading artifacts...
493public: found 316 matching files and directories
494Uploading artifacts as "archive" to coordinator... 201 Created id=422757 responseStatus=201 Created token=glcbt-64
495 Cleaning up project directory and file based variables 00:02
496Job succeeded